G605721


Basic Information

Item Value
gene id G605721
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 39328979 ~ 39329740 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU689804
TCATTAaccatctctctcccacacacacacagctagcatgACAAAATGTTGACATGacaatattcacacacacacacacacacatacacacaattactGTCACTAACTAAACAGATATCAAAAAGCTAGCTAGGTACAACCAATGCCTACAACAGGtacaaatgtaaatgtacatgGACGTATAGCCagagagctaacgttagctagctataaaATCTGTCAGCAGTTTCCTTGATGTTCTTCTCCCCAACAAACCACTGCTTTACTTACAAAAGTAAAACAAGAATGCAGGAGAACAGGGACCACCATTTAGCAGATTAGAGATCTATTGCTGCACGCAAGGCACAGATTCCAATCCAAGTTTTATGCCTACCTCCTTATTTAGCTACTGAAATATGCCTACCTCCTTATTTAGCTACTGAAATATGCCTACCTCCGTATTTAGCTACTGAAATATGCCTACCTCCTTATTTAGCTACTGAAATATGCCTACCTCCTTATTTAGCTACTGAAATATGCCTACCTCCTTATTTAGCTACTGAAATATGCCTACCTCCTTATTTAGCTACTGAAAAATGCCTACCTCCTTATTTAGCTACTGAAATATGCCTACCTCCTTATTTAGCTACTGAAATATGCCTACCTCCTTATTTAGCTACTAAAATGAAAATACAACTACTGCACACATTATGTTAATTGCTTAAAAGCTTTAAGGGAAAATATAATAGTCATATTTTCAA

Function

NR:

description
PREDICTED: serine/arginine repetitive matrix protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU689804 True 740 lncRNA 0.37 2 39328979 39329740

Neighbor

gene id symbol gene type direction distance location
LOC110527728 NA coding downstream 101206 39211234 ~ 39227773 (-)
LOC110527726 LOC106566095 coding downstream 147730 39179704 ~ 39181249 (-)
LOC110527724 LOC106582698 coding downstream 165345 39131441 ~ 39163634 (-)
LOC110527723 LOC106582696 coding downstream 205401 39063005 ~ 39123578 (-)
LOC110527722 LOC106582694 coding downstream 273767 38933801 ~ 39055212 (-)
LOC110527733 LOC106582705 coding upstream 47368 39377108 ~ 39401955 (-)
LOC110527738 LOC106582708 coding upstream 697467 40027207 ~ 40101150 (-)
LOC110527740 LOC100194559 coding upstream 785847 40115587 ~ 40134473 (-)
LOC110527741 LOC106582711 coding upstream 805558 40135298 ~ 40275270 (-)
pkp1b LOC106582715 coding upstream 994766 40324506 ~ 40346140 (-)
G605680 NA non-coding downstream 58834 39265674 ~ 39270145 (-)
G605555 NA non-coding downstream 84033 39195613 ~ 39244946 (-)
G605575 NA non-coding downstream 199918 39085829 ~ 39129061 (-)
G605750 NA non-coding upstream 76771 39406511 ~ 39406727 (-)
G605761 NA non-coding upstream 92480 39422220 ~ 39422509 (-)
G605767 NA non-coding upstream 100198 39429938 ~ 39430378 (-)
G605792 NA non-coding upstream 125077 39454817 ~ 39455154 (-)
G605798 NA non-coding upstream 134380 39464120 ~ 39464364 (-)
G604484 NA other downstream 689579 38584293 ~ 38639400 (-)
G604485 NA other downstream 731460 38589155 ~ 38597519 (-)
G601245 NA other downstream 3567709 35760699 ~ 35761270 (-)
G600881 NA other downstream 4273751 35001880 ~ 35055228 (-)
G606135 NA other upstream 509151 39838891 ~ 39841331 (-)
G606973 NA other upstream 1299509 40629249 ~ 40629880 (-)
LOC110527764 LOC106582736 other upstream 1826930 41156665 ~ 41348915 (-)
G607932 NA other upstream 1831408 41161148 ~ 41163397 (-)

Expression


Co-expression Network