G605077


Basic Information

Item Value
gene id G605077
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 39353629 ~ 39353918 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU689129
ggcaattaaggtaacagttatgaaaactaatgacactaaagaggcctttctactgactctgaaaaacaccaaaagaaagatgcccagggtccctgctcatctgcgtgaacgtgcctttggcatgctgcaaggaggcatgaggtctGCTGATGTGCaaaggcaataaattgcaatgtccgtattgtgagacgcctaagacagtgctacagggagacaggacggacagctgatcgtcctcgcagtggcagaccacgtgtaacaacacctgcacaggattggtacatccgaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU689129 True 290 lncRNA 0.49 1 39353629 39353918

Neighbor

gene id symbol gene type direction distance location
LOC110527730 LOC106582703 coding upstream 43395 39291656 ~ 39310234 (+)
LOC110527729 LOC106582701 coding upstream 113421 39228701 ~ 39240208 (+)
LOC110527727 LOC106582699 coding upstream 152051 39191081 ~ 39201578 (+)
lhfpl5a LOC106582689 coding upstream 649585 38690340 ~ 38704044 (+)
LOC110527711 LOC106582683 coding upstream 1086283 38260379 ~ 38267346 (+)
LOC110527735 LOC106582706 coding downstream 16812 39370730 ~ 39376856 (+)
LOC110527736 LOC106582707 coding downstream 79271 39433189 ~ 39773724 (+)
LOC110527739 LOC106582710 coding downstream 638848 39992766 ~ 40027458 (+)
csrp1b LOC106582712 coding downstream 929635 40283553 ~ 40287403 (+)
tnni1b LOC100462680 coding downstream 938122 40292040 ~ 40296179 (+)
G605063 NA non-coding upstream 14479 39338866 ~ 39339150 (+)
G605027 NA non-coding upstream 19992 39325121 ~ 39333637 (+)
G604940 NA non-coding upstream 108677 39195655 ~ 39244952 (+)
G604923 NA non-coding upstream 213993 39138458 ~ 39139636 (+)
G604891 NA non-coding upstream 269139 39078190 ~ 39084490 (+)
G605079 NA non-coding downstream 1601 39355519 ~ 39355791 (+)
G605110 NA non-coding downstream 53456 39407374 ~ 39407581 (+)
G605111 NA non-coding downstream 55211 39409129 ~ 39409333 (+)
G605121 NA non-coding downstream 69278 39423196 ~ 39423407 (+)
G605126 NA non-coding downstream 74544 39428462 ~ 39429112 (+)
G604258 NA other upstream 762335 38584474 ~ 38594822 (+)
G604207 NA other upstream 853967 38499031 ~ 38499662 (+)
G602295 gli1 other upstream 2262873 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 2777557 36573811 ~ 36582978 (+)
G600531 NA other upstream 4382224 34971128 ~ 34971405 (+)
G606400 LOC105027254 other downstream 772616 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 852651 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 869257 40223027 ~ 40224171 (+)
G606469 NA other downstream 876967 40230885 ~ 40231225 (+)
LOC110527751 NA other downstream 1085182 40438879 ~ 40457742 (+)

Expression


Co-expression Network