Gene
RNA
| Item | Value |
|---|---|
| gene id | G605110 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 39407374 ~ 39407581 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU689162 | True | 208 | lncRNA | 0.35 | 1 | 39407374 | 39407581 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527735 | LOC106582706 | coding | upstream | 30518 | 39370730 ~ 39376856 (+) |
| LOC110527730 | LOC106582703 | coding | upstream | 97140 | 39291656 ~ 39310234 (+) |
| LOC110527729 | LOC106582701 | coding | upstream | 167166 | 39228701 ~ 39240208 (+) |
| LOC110527727 | LOC106582699 | coding | upstream | 205796 | 39191081 ~ 39201578 (+) |
| lhfpl5a | LOC106582689 | coding | upstream | 703330 | 38690340 ~ 38704044 (+) |
| LOC110527736 | LOC106582707 | coding | downstream | 25608 | 39433189 ~ 39773724 (+) |
| LOC110527739 | LOC106582710 | coding | downstream | 585185 | 39992766 ~ 40027458 (+) |
| csrp1b | LOC106582712 | coding | downstream | 875972 | 40283553 ~ 40287403 (+) |
| tnni1b | LOC100462680 | coding | downstream | 884459 | 40292040 ~ 40296179 (+) |
| tnnt2b | LOC106582714 | coding | downstream | 897541 | 40305122 ~ 40314447 (+) |
| G605079 | NA | non-coding | upstream | 51583 | 39355519 ~ 39355791 (+) |
| G605077 | NA | non-coding | upstream | 53456 | 39353629 ~ 39353918 (+) |
| G605063 | NA | non-coding | upstream | 68224 | 39338866 ~ 39339150 (+) |
| G605027 | NA | non-coding | upstream | 73737 | 39325121 ~ 39333637 (+) |
| G604940 | NA | non-coding | upstream | 162422 | 39195655 ~ 39244952 (+) |
| G605111 | NA | non-coding | downstream | 1548 | 39409129 ~ 39409333 (+) |
| G605121 | NA | non-coding | downstream | 15615 | 39423196 ~ 39423407 (+) |
| G605126 | NA | non-coding | downstream | 20881 | 39428462 ~ 39429112 (+) |
| G605146 | NA | non-coding | downstream | 43625 | 39451206 ~ 39451418 (+) |
| G604258 | NA | other | upstream | 816080 | 38584474 ~ 38594822 (+) |
| G604207 | NA | other | upstream | 907712 | 38499031 ~ 38499662 (+) |
| G602295 | gli1 | other | upstream | 2316618 | 37089624 ~ 37090756 (+) |
| LOC110527686 | LOC106582662 | other | upstream | 2831302 | 36573811 ~ 36582978 (+) |
| G600531 | NA | other | upstream | 4435969 | 34971128 ~ 34971405 (+) |
| G606400 | LOC105027254 | other | downstream | 718953 | 40126534 ~ 40141972 (+) |
| G606452 | LOC106582711 | other | downstream | 798988 | 40206569 ~ 40206897 (+) |
| G606464 | LOC106582711 | other | downstream | 815594 | 40223027 ~ 40224171 (+) |
| G606469 | NA | other | downstream | 823304 | 40230885 ~ 40231225 (+) |
| LOC110527751 | NA | other | downstream | 1031519 | 40438879 ~ 40457742 (+) |
