G605126


Basic Information

Item Value
gene id G605126
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 39428462 ~ 39429112 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU689178
ACATGAATCAATTCTTAAAATATAGACCAACGCTTTAGCCATTGCTGTGTTGCGAGAGAGAGAAGCACGCCTGTATCTCTCAGAACTAAAATGAGTTTCACTTTCTAtgatctctctacctctctgttgTTATAGACATACgcctgcaactctcatctctccagcattgcacttcatcatttatttccttatagaacAATAGCTGCTGGAAGTGTGCTGGAGGGGCTGCTGCTCTCTGCTGCCTGTTCAGAAAGAAATAATTCAGAATACTGAACCAGGAGTAAGCCAATagtttagccacagaggatcaatagctaattttaaaaaaatagcctagctgtggattgtgtgtagccAAATCACAAGGCATGCCTCCGGAACGTGCAGCAAATCTGTCAGTAAACAACATGCAGCCAAAACAGGCCTTACTCAATATTTCGCATGCAATCGTGGGAAAACACAGTCTGGAAAGCAAATGGACCCTGCTGAAAATAATATTTTAATCTGTCTGTATGTTGCCAAGTTATCAACTTCCAAATAGGCCTATTGAGTGAACAGcattgttttacaaagtaaagCAAGAAAGAGATAAGCTTTTGGCAGGTGagtgagctgcgcatcattgggtgagACAGTGAAACTGGAAAACTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU689178 True 651 lncRNA 0.41 1 39428462 39429112

Neighbor

gene id symbol gene type direction distance location
LOC110527735 LOC106582706 coding upstream 51606 39370730 ~ 39376856 (+)
LOC110527730 LOC106582703 coding upstream 118228 39291656 ~ 39310234 (+)
LOC110527729 LOC106582701 coding upstream 188254 39228701 ~ 39240208 (+)
LOC110527727 LOC106582699 coding upstream 226884 39191081 ~ 39201578 (+)
lhfpl5a LOC106582689 coding upstream 724418 38690340 ~ 38704044 (+)
LOC110527736 LOC106582707 coding downstream 4077 39433189 ~ 39773724 (+)
LOC110527739 LOC106582710 coding downstream 563654 39992766 ~ 40027458 (+)
csrp1b LOC106582712 coding downstream 854441 40283553 ~ 40287403 (+)
tnni1b LOC100462680 coding downstream 862928 40292040 ~ 40296179 (+)
tnnt2b LOC106582714 coding downstream 876010 40305122 ~ 40314447 (+)
G605121 NA non-coding upstream 5055 39423196 ~ 39423407 (+)
G605111 NA non-coding upstream 19129 39409129 ~ 39409333 (+)
G605110 NA non-coding upstream 20881 39407374 ~ 39407581 (+)
G605079 NA non-coding upstream 72671 39355519 ~ 39355791 (+)
G605077 NA non-coding upstream 74544 39353629 ~ 39353918 (+)
G605146 NA non-coding downstream 22094 39451206 ~ 39451418 (+)
G605150 NA non-coding downstream 25299 39454411 ~ 39454626 (+)
G605152 NA non-coding downstream 26631 39455743 ~ 39455980 (+)
G605158 NA non-coding downstream 34812 39463924 ~ 39464226 (+)
G604258 NA other upstream 837168 38584474 ~ 38594822 (+)
G604207 NA other upstream 928800 38499031 ~ 38499662 (+)
G602295 gli1 other upstream 2337706 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 2852390 36573811 ~ 36582978 (+)
G600531 NA other upstream 4457057 34971128 ~ 34971405 (+)
G606400 LOC105027254 other downstream 697422 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 777457 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 794063 40223027 ~ 40224171 (+)
G606469 NA other downstream 801773 40230885 ~ 40231225 (+)
LOC110527751 NA other downstream 1009988 40438879 ~ 40457742 (+)

Expression


Co-expression Network