G605152


Basic Information

Item Value
gene id G605152
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 39455743 ~ 39455980 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU689205
ctggcaaccttggctagcgcgcactgcgcccggtccgccacaggagtcgctggtgcacgatgagacaaggacatccctaccgaccaagctctccctaacccagacgacgctaggccaattgtgcatcgccccatggacctcccagtcgcggccggttacaacagagcctgggtgcaaacccagagtctctgatggcacagctggcgctgcagtacagcgcccttaaccactgcgccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU689205 True 238 lncRNA 0.63 1 39455743 39455980

Neighbor

gene id symbol gene type direction distance location
LOC110527735 LOC106582706 coding upstream 78887 39370730 ~ 39376856 (+)
LOC110527730 LOC106582703 coding upstream 145509 39291656 ~ 39310234 (+)
LOC110527729 LOC106582701 coding upstream 215535 39228701 ~ 39240208 (+)
LOC110527727 LOC106582699 coding upstream 254165 39191081 ~ 39201578 (+)
lhfpl5a LOC106582689 coding upstream 751699 38690340 ~ 38704044 (+)
LOC110527739 LOC106582710 coding downstream 536786 39992766 ~ 40027458 (+)
csrp1b LOC106582712 coding downstream 827573 40283553 ~ 40287403 (+)
tnni1b LOC100462680 coding downstream 836060 40292040 ~ 40296179 (+)
tnnt2b LOC106582714 coding downstream 849142 40305122 ~ 40314447 (+)
LOC110527751 NA coding downstream 982899 40438879 ~ 40457742 (+)
G605150 NA non-coding upstream 1117 39454411 ~ 39454626 (+)
G605146 NA non-coding upstream 4325 39451206 ~ 39451418 (+)
LOC110527736 LOC106582707 non-coding upstream 21715 39433189 ~ 39773724 (+)
G605126 NA non-coding upstream 26631 39428462 ~ 39429112 (+)
G605121 NA non-coding upstream 32336 39423196 ~ 39423407 (+)
G605158 NA non-coding downstream 7944 39463924 ~ 39464226 (+)
G605164 NA non-coding downstream 11597 39467577 ~ 39467779 (+)
G605248 NA non-coding downstream 124065 39580045 ~ 39586327 (+)
G606405 NA non-coding downstream 646076 40102056 ~ 40102303 (+)
G604258 NA other upstream 864449 38584474 ~ 38594822 (+)
G604207 NA other upstream 956081 38499031 ~ 38499662 (+)
G602295 gli1 other upstream 2364987 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 2879671 36573811 ~ 36582978 (+)
G600531 NA other upstream 4484338 34971128 ~ 34971405 (+)
G606400 LOC105027254 other downstream 670554 40126534 ~ 40141972 (+)
G606452 LOC106582711 other downstream 750589 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 767195 40223027 ~ 40224171 (+)
G606469 NA other downstream 774905 40230885 ~ 40231225 (+)

Expression


Co-expression Network