Gene
RNA
| Item | Value |
|---|---|
| gene id | G606192 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 39934438 ~ 39939339 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: thrombospondin-3b-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU690293 | True | 244 | lncRNA | 0.59 | 2 | 39934438 | 39939339 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527733 | LOC106582705 | coding | downstream | 532483 | 39377108 ~ 39401955 (-) |
| LOC110527731 | LOC106582704 | coding | downstream | 564911 | 39315167 ~ 39369527 (-) |
| LOC110527728 | NA | coding | downstream | 706665 | 39211234 ~ 39227773 (-) |
| LOC110527726 | LOC106566095 | coding | downstream | 753189 | 39179704 ~ 39181249 (-) |
| LOC110527724 | LOC106582698 | coding | downstream | 770804 | 39131441 ~ 39163634 (-) |
| LOC110527738 | LOC106582708 | coding | upstream | 87868 | 40027207 ~ 40101150 (-) |
| LOC110527740 | LOC100194559 | coding | upstream | 176248 | 40115587 ~ 40134473 (-) |
| LOC110527741 | LOC106582711 | coding | upstream | 195959 | 40135298 ~ 40275270 (-) |
| pkp1b | LOC106582715 | coding | upstream | 385167 | 40324506 ~ 40346140 (-) |
| smpd2b | smpd2 | coding | upstream | 408722 | 40348061 ~ 40360586 (-) |
| G606010 | NA | non-coding | downstream | 151049 | 39782812 ~ 39783389 (-) |
| G606001 | NA | non-coding | downstream | 163589 | 39767234 ~ 39770849 (-) |
| G605882 | NA | non-coding | downstream | 348130 | 39579623 ~ 39586308 (-) |
| G605847 | NA | non-coding | downstream | 371070 | 39528933 ~ 39563368 (-) |
| G605801 | NA | non-coding | downstream | 460185 | 39473871 ~ 39474253 (-) |
| G606212 | NA | non-coding | upstream | 25059 | 39964398 ~ 39964624 (-) |
| G606216 | NA | non-coding | upstream | 27290 | 39966629 ~ 39966904 (-) |
| G606517 | NA | non-coding | upstream | 169744 | 40109083 ~ 40109322 (-) |
| G606550 | NA | non-coding | upstream | 242232 | 40181571 ~ 40181794 (-) |
| G606557 | NA | non-coding | upstream | 250752 | 40190091 ~ 40190318 (-) |
| G606135 | NA | other | downstream | 93107 | 39838891 ~ 39841331 (-) |
| LOC110527723 | LOC106582696 | other | downstream | 865610 | 39063005 ~ 39123578 (-) |
| G604484 | NA | other | downstream | 1295038 | 38584293 ~ 38639400 (-) |
| G604485 | NA | other | downstream | 1336919 | 38589155 ~ 38597519 (-) |
| G601245 | NA | other | downstream | 4173168 | 35760699 ~ 35761270 (-) |
| G606973 | NA | other | upstream | 689910 | 40629249 ~ 40629880 (-) |
| LOC110527764 | LOC106582736 | other | upstream | 1217331 | 41156665 ~ 41348915 (-) |
| G607932 | NA | other | upstream | 1221809 | 41161148 ~ 41163397 (-) |
| G608888 | LOC106582750 | other | upstream | 2005232 | 41944571 ~ 41951244 (-) |
