Gene
RNA
| Item | Value |
|---|---|
| gene id | G606409 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 40107638 ~ 40107868 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU690519 | True | 231 | lncRNA | 0.43 | 1 | 40107638 | 40107868 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527739 | LOC106582710 | coding | upstream | 80180 | 39992766 ~ 40027458 (+) |
| LOC110527736 | LOC106582707 | coding | upstream | 333914 | 39433189 ~ 39773724 (+) |
| LOC110527735 | LOC106582706 | coding | upstream | 730782 | 39370730 ~ 39376856 (+) |
| LOC110527730 | LOC106582703 | coding | upstream | 797404 | 39291656 ~ 39310234 (+) |
| LOC110527729 | LOC106582701 | coding | upstream | 867430 | 39228701 ~ 39240208 (+) |
| csrp1b | LOC106582712 | coding | downstream | 175685 | 40283553 ~ 40287403 (+) |
| tnni1b | LOC100462680 | coding | downstream | 184172 | 40292040 ~ 40296179 (+) |
| tnnt2b | LOC106582714 | coding | downstream | 197254 | 40305122 ~ 40314447 (+) |
| LOC110527751 | NA | coding | downstream | 331011 | 40438879 ~ 40457742 (+) |
| LOC110527752 | LOC106582721 | coding | downstream | 365898 | 40473766 ~ 40481140 (+) |
| G606405 | NA | non-coding | upstream | 5335 | 40102056 ~ 40102303 (+) |
| G605248 | NA | non-coding | upstream | 521311 | 39580045 ~ 39586327 (+) |
| G605164 | NA | non-coding | upstream | 639859 | 39467577 ~ 39467779 (+) |
| G605158 | NA | non-coding | upstream | 643412 | 39463924 ~ 39464226 (+) |
| G606411 | NA | non-coding | downstream | 501 | 40108369 ~ 40108609 (+) |
| G606412 | NA | non-coding | downstream | 7720 | 40115588 ~ 40125497 (+) |
| G606400 | LOC105027254 | non-coding | downstream | 19592 | 40126534 ~ 40141972 (+) |
| G606414 | NA | non-coding | downstream | 27894 | 40135762 ~ 40140407 (+) |
| G606436 | LOC106582711 | non-coding | downstream | 68782 | 40176650 ~ 40176947 (+) |
| G604258 | NA | other | upstream | 1516344 | 38584474 ~ 38594822 (+) |
| G604207 | NA | other | upstream | 1607976 | 38499031 ~ 38499662 (+) |
| G602295 | gli1 | other | upstream | 3016882 | 37089624 ~ 37090756 (+) |
| LOC110527686 | LOC106582662 | other | upstream | 3531566 | 36573811 ~ 36582978 (+) |
| G600531 | NA | other | upstream | 5136233 | 34971128 ~ 34971405 (+) |
| G606452 | LOC106582711 | other | downstream | 98701 | 40206569 ~ 40206897 (+) |
| G606464 | LOC106582711 | other | downstream | 115307 | 40223027 ~ 40224171 (+) |
| G606469 | NA | other | downstream | 123017 | 40230885 ~ 40231225 (+) |
