G606411


Basic Information

Item Value
gene id G606411
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40108369 ~ 40108609 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU690521
accggtggaaatctgtcctttggtctgatgagtccaaatttgagatttttggtttcaacagtcatgtctttgtgagacgctcaGTAGGTagatggatgatctccgcatctgtggttcccaccatgaagcatggaggaggaggtgtgatggtgtgggggtgctttgctggagtcactgtcagtgatttatttagaattcaaggcacacttaaccagcatggctaccacaatgttctgcagcg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU690521 True 241 lncRNA 0.47 1 40108369 40108609

Neighbor

gene id symbol gene type direction distance location
LOC110527739 LOC106582710 coding upstream 80911 39992766 ~ 40027458 (+)
LOC110527736 LOC106582707 coding upstream 334645 39433189 ~ 39773724 (+)
LOC110527735 LOC106582706 coding upstream 731513 39370730 ~ 39376856 (+)
LOC110527730 LOC106582703 coding upstream 798135 39291656 ~ 39310234 (+)
LOC110527729 LOC106582701 coding upstream 868161 39228701 ~ 39240208 (+)
csrp1b LOC106582712 coding downstream 174944 40283553 ~ 40287403 (+)
tnni1b LOC100462680 coding downstream 183431 40292040 ~ 40296179 (+)
tnnt2b LOC106582714 coding downstream 196513 40305122 ~ 40314447 (+)
LOC110527751 NA coding downstream 330270 40438879 ~ 40457742 (+)
LOC110527752 LOC106582721 coding downstream 365157 40473766 ~ 40481140 (+)
G606409 NA non-coding upstream 501 40107638 ~ 40107868 (+)
G606405 NA non-coding upstream 6066 40102056 ~ 40102303 (+)
G605248 NA non-coding upstream 522042 39580045 ~ 39586327 (+)
G605164 NA non-coding upstream 640590 39467577 ~ 39467779 (+)
G606412 NA non-coding downstream 6979 40115588 ~ 40125497 (+)
G606400 LOC105027254 non-coding downstream 18851 40126534 ~ 40141972 (+)
G606414 NA non-coding downstream 27153 40135762 ~ 40140407 (+)
G606436 LOC106582711 non-coding downstream 68041 40176650 ~ 40176947 (+)
G606439 NA non-coding downstream 70572 40179181 ~ 40179502 (+)
G604258 NA other upstream 1517075 38584474 ~ 38594822 (+)
G604207 NA other upstream 1608707 38499031 ~ 38499662 (+)
G602295 gli1 other upstream 3017613 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 3532297 36573811 ~ 36582978 (+)
G600531 NA other upstream 5136964 34971128 ~ 34971405 (+)
G606452 LOC106582711 other downstream 97960 40206569 ~ 40206897 (+)
G606464 LOC106582711 other downstream 114566 40223027 ~ 40224171 (+)
G606469 NA other downstream 122276 40230885 ~ 40231225 (+)

Expression


Co-expression Network