G606436 (LOC106582711)


Basic Information

Item Value
gene id G606436
gene name LOC106582711
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40176650 ~ 40176947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU690558
GCCACTTTCAGGACGCTTTGAGAGGTGTGCGTGATGGGTGAGGTCACGCCCACAGGGGGGTTGCGTCCCTTTTTAAAGTTCCCTGGCTGACCCAGGCTCTGGGGCTTCCTCAGTTCCCCCTTGACCCCCGCGTCCTCACTAGCACCCTCCATGGGTCTGGAGGACTTCCTCCACTTGCTGGGGGTCTCGGTTTTGAGGCTCCCTGTCTCGTAGCCGCTCCCGTCCATCTTGCGTGCAGCTTTGGCATCCTCGCTGTACCAGGACAGGCCACTCTCCACCAGGGAGCGCTTCTCAGCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU690558 True 298 lncRNA 0.61 1 40176650 40176947

Neighbor

gene id symbol gene type direction distance location
LOC110527739 LOC106582710 coding upstream 149192 39992766 ~ 40027458 (+)
LOC110527736 LOC106582707 coding upstream 402926 39433189 ~ 39773724 (+)
LOC110527735 LOC106582706 coding upstream 799794 39370730 ~ 39376856 (+)
LOC110527730 LOC106582703 coding upstream 866416 39291656 ~ 39310234 (+)
LOC110527729 LOC106582701 coding upstream 936442 39228701 ~ 39240208 (+)
csrp1b LOC106582712 coding downstream 106606 40283553 ~ 40287403 (+)
tnni1b LOC100462680 coding downstream 115093 40292040 ~ 40296179 (+)
tnnt2b LOC106582714 coding downstream 128175 40305122 ~ 40314447 (+)
LOC110527751 NA coding downstream 261932 40438879 ~ 40457742 (+)
LOC110527752 LOC106582721 coding downstream 296819 40473766 ~ 40481140 (+)
G606400 LOC105027254 non-coding upstream 34678 40126534 ~ 40141972 (+)
G606414 NA non-coding upstream 36243 40135762 ~ 40140407 (+)
G606412 NA non-coding upstream 51153 40115588 ~ 40125497 (+)
G606411 NA non-coding upstream 68041 40108369 ~ 40108609 (+)
G606409 NA non-coding upstream 68782 40107638 ~ 40107868 (+)
G606439 NA non-coding downstream 2234 40179181 ~ 40179502 (+)
G606442 NA non-coding downstream 9840 40186787 ~ 40187269 (+)
G606450 NA non-coding downstream 18954 40195901 ~ 40196105 (+)
G606462 NA non-coding downstream 43307 40220254 ~ 40220539 (+)
G606464 LOC106582711 non-coding downstream 46080 40223027 ~ 40224171 (+)
G604258 NA other upstream 1585356 38584474 ~ 38594822 (+)
G604207 NA other upstream 1676988 38499031 ~ 38499662 (+)
G602295 gli1 other upstream 3085894 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 3600578 36573811 ~ 36582978 (+)
G606452 LOC106582711 other downstream 29622 40206569 ~ 40206897 (+)
G606469 NA other downstream 53938 40230885 ~ 40231225 (+)
G606977 NA other downstream 457234 40634181 ~ 40634439 (+)

Expression


Co-expression Network