G606439


Basic Information

Item Value
gene id G606439
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40179181 ~ 40179502 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU690561
ttactgtgtgtgtgtgtgcgtgtgtgcgtgtgtgcgtgtgtgcgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcagatagTACAGCTACATTGTCTGTAAACAGAAGTACATAAACATAGCTAAGGCTGATGTGATTGAATGTGGCCTTTACTCACCATGACAGAGGAGTTGCGTCTGGAGCCGAGGGGCGTGGTGGGCAGGGAGTTGAGGGAGGAGCTGGCGTTGAACTCCTCAGAGCTGAGGTTGTCTACAGAGCCATCGCTGAGCCCACTGCTGATGGAGCTGCTCTCATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU690561 True 322 lncRNA 0.52 1 40179181 40179502

Neighbor

gene id symbol gene type direction distance location
LOC110527739 LOC106582710 coding upstream 151723 39992766 ~ 40027458 (+)
LOC110527736 LOC106582707 coding upstream 405457 39433189 ~ 39773724 (+)
LOC110527735 LOC106582706 coding upstream 802325 39370730 ~ 39376856 (+)
LOC110527730 LOC106582703 coding upstream 868947 39291656 ~ 39310234 (+)
LOC110527729 LOC106582701 coding upstream 938973 39228701 ~ 39240208 (+)
csrp1b LOC106582712 coding downstream 104051 40283553 ~ 40287403 (+)
tnni1b LOC100462680 coding downstream 112538 40292040 ~ 40296179 (+)
tnnt2b LOC106582714 coding downstream 125620 40305122 ~ 40314447 (+)
LOC110527751 NA coding downstream 259377 40438879 ~ 40457742 (+)
LOC110527752 LOC106582721 coding downstream 294264 40473766 ~ 40481140 (+)
G606436 LOC106582711 non-coding upstream 2234 40176650 ~ 40176947 (+)
G606400 LOC105027254 non-coding upstream 37209 40126534 ~ 40141972 (+)
G606414 NA non-coding upstream 38774 40135762 ~ 40140407 (+)
G606412 NA non-coding upstream 53684 40115588 ~ 40125497 (+)
G606411 NA non-coding upstream 70572 40108369 ~ 40108609 (+)
G606442 NA non-coding downstream 7285 40186787 ~ 40187269 (+)
G606450 NA non-coding downstream 16399 40195901 ~ 40196105 (+)
G606462 NA non-coding downstream 40752 40220254 ~ 40220539 (+)
G606464 LOC106582711 non-coding downstream 43525 40223027 ~ 40224171 (+)
G606466 NA non-coding downstream 48178 40227680 ~ 40227931 (+)
G604258 NA other upstream 1587887 38584474 ~ 38594822 (+)
G604207 NA other upstream 1679519 38499031 ~ 38499662 (+)
G602295 gli1 other upstream 3088425 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 3603109 36573811 ~ 36582978 (+)
G606452 LOC106582711 other downstream 27067 40206569 ~ 40206897 (+)
G606469 NA other downstream 51383 40230885 ~ 40231225 (+)
G606977 NA other downstream 454679 40634181 ~ 40634439 (+)

Expression


Co-expression Network