G606442


Basic Information

Item Value
gene id G606442
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40186787 ~ 40187269 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU690564
TTTCGTTGTTCAACTCTTGAAGTAAAACAAACTGTTTTCAAATTCCGCGTGTTCACTGTATTCAGAATAATTTACAGAGCTACAGTAGATCGTCTGACATTGATACACGCAGACCAGTATCGCCGCAGATCTCTGCTTAGCGCTTACCTTGGACTAAAATGTATCGTCTTTTTCGCACAGGGCGCCGTCCGCTGGCGCTGCCCCATTGGCGGCACTTTCCCAATTAGCACACGTCCGCTCATATTCGCGCAATTCTGACATCAACGAGCATTTTTACAATCATTTCCCGTAGTATCCATGTAGCCTCAAGGAACGCTCCATTCAAATTCTGATATTCACTGCAACAACCTCCGATTCCCTGTTCCCCCAGTAAGGACTGCGAAACCGTTAGGAAACACCTCCAAAAAAGTGACCCCCACCccccctactctccctctcctgaTGGCTAACAGCTGTTGTTCAACTGTTCCCAAAACCTCGCAT

Function

NR:

description
PREDICTED: neuron navigator 1-like isoform X15

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU690564 True 483 lncRNA 0.47 1 40186787 40187269

Neighbor

gene id symbol gene type direction distance location
LOC110527739 LOC106582710 coding upstream 159329 39992766 ~ 40027458 (+)
LOC110527736 LOC106582707 coding upstream 413063 39433189 ~ 39773724 (+)
LOC110527735 LOC106582706 coding upstream 809931 39370730 ~ 39376856 (+)
LOC110527730 LOC106582703 coding upstream 876553 39291656 ~ 39310234 (+)
LOC110527729 LOC106582701 coding upstream 946579 39228701 ~ 39240208 (+)
csrp1b LOC106582712 coding downstream 96284 40283553 ~ 40287403 (+)
tnni1b LOC100462680 coding downstream 104771 40292040 ~ 40296179 (+)
tnnt2b LOC106582714 coding downstream 117853 40305122 ~ 40314447 (+)
LOC110527751 NA coding downstream 251610 40438879 ~ 40457742 (+)
LOC110527752 LOC106582721 coding downstream 286497 40473766 ~ 40481140 (+)
G606439 NA non-coding upstream 7285 40179181 ~ 40179502 (+)
G606436 LOC106582711 non-coding upstream 9840 40176650 ~ 40176947 (+)
G606400 LOC105027254 non-coding upstream 44815 40126534 ~ 40141972 (+)
G606414 NA non-coding upstream 46380 40135762 ~ 40140407 (+)
G606412 NA non-coding upstream 61290 40115588 ~ 40125497 (+)
G606450 NA non-coding downstream 8632 40195901 ~ 40196105 (+)
G606462 NA non-coding downstream 32985 40220254 ~ 40220539 (+)
G606464 LOC106582711 non-coding downstream 35758 40223027 ~ 40224171 (+)
G606466 NA non-coding downstream 40411 40227680 ~ 40227931 (+)
G606471 NA non-coding downstream 45784 40233053 ~ 40233361 (+)
G604258 NA other upstream 1595493 38584474 ~ 38594822 (+)
G604207 NA other upstream 1687125 38499031 ~ 38499662 (+)
G602295 gli1 other upstream 3096031 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 3610715 36573811 ~ 36582978 (+)
G606452 LOC106582711 other downstream 19300 40206569 ~ 40206897 (+)
G606469 NA other downstream 43616 40230885 ~ 40231225 (+)
G606977 NA other downstream 446912 40634181 ~ 40634439 (+)

Expression


Co-expression Network