G606452 (LOC106582711)


Basic Information

Item Value
gene id G606452
gene name LOC106582711
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40206569 ~ 40206897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU690574
GCTAGGTTGTCATCGTCATCCTCTGGCATGCTCTTTCCCAGCAGGTCGCTGTCGCTCAGGTAACCAGACTTGAGGTCAGCATCGTCCACATCCAGCCCTTCGATGAGCTCTATTCGGGAGGAGTGGCTGAGACGGCTGGAGACTCGGGCAGGCATGGTGTGGGCCGTATACTGGGACCCGGCCTTTCCCCCATGGTACACGCCGCTGCCCGTGGACGAGGGGGCGTCTCCAGCCTGCAGCCGGGGGCTGGACTGGCCGTGGCgccaggagagaggagacgagcGATTGGACAGACTGGACATGCTGCGGGCATTGGTCTCGTCACTGTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU690574 True 329 TUCP 0.63 1 40206569 40206897

Neighbor

gene id symbol gene type direction distance location
LOC110527739 LOC106582710 coding upstream 179111 39992766 ~ 40027458 (+)
LOC110527736 LOC106582707 coding upstream 432845 39433189 ~ 39773724 (+)
LOC110527735 LOC106582706 coding upstream 829713 39370730 ~ 39376856 (+)
LOC110527730 LOC106582703 coding upstream 896335 39291656 ~ 39310234 (+)
LOC110527729 LOC106582701 coding upstream 966361 39228701 ~ 39240208 (+)
csrp1b LOC106582712 coding downstream 76656 40283553 ~ 40287403 (+)
tnni1b LOC100462680 coding downstream 85143 40292040 ~ 40296179 (+)
tnnt2b LOC106582714 coding downstream 98225 40305122 ~ 40314447 (+)
LOC110527751 NA coding downstream 231982 40438879 ~ 40457742 (+)
LOC110527752 LOC106582721 coding downstream 266869 40473766 ~ 40481140 (+)
G606450 NA non-coding upstream 10464 40195901 ~ 40196105 (+)
G606442 NA non-coding upstream 19300 40186787 ~ 40187269 (+)
G606439 NA non-coding upstream 27067 40179181 ~ 40179502 (+)
G606436 LOC106582711 non-coding upstream 29622 40176650 ~ 40176947 (+)
G606400 LOC105027254 non-coding upstream 64597 40126534 ~ 40141972 (+)
G606462 NA non-coding downstream 13357 40220254 ~ 40220539 (+)
G606464 LOC106582711 non-coding downstream 16130 40223027 ~ 40224171 (+)
G606466 NA non-coding downstream 20783 40227680 ~ 40227931 (+)
G606471 NA non-coding downstream 26156 40233053 ~ 40233361 (+)
G606483 NA non-coding downstream 42967 40249864 ~ 40250065 (+)
G604258 NA other upstream 1615275 38584474 ~ 38594822 (+)
G604207 NA other upstream 1706907 38499031 ~ 38499662 (+)
G602295 gli1 other upstream 3115813 37089624 ~ 37090756 (+)
LOC110527686 LOC106582662 other upstream 3630497 36573811 ~ 36582978 (+)
G606469 NA other downstream 23988 40230885 ~ 40231225 (+)
G606977 NA other downstream 427284 40634181 ~ 40634439 (+)
G607904 NA other downstream 1255927 41462824 ~ 41463169 (+)

Expression


Co-expression Network