Gene
RNA
| Item | Value |
|---|---|
| gene id | G606570 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 40217113 ~ 40217426 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU690701 | True | 314 | lncRNA | 0.43 | 1 | 40217113 | 40217426 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527740 | LOC100194559 | coding | downstream | 82640 | 40115587 ~ 40134473 (-) |
| LOC110527738 | LOC106582708 | coding | downstream | 115963 | 40027207 ~ 40101150 (-) |
| LOC110527733 | LOC106582705 | coding | downstream | 815158 | 39377108 ~ 39401955 (-) |
| LOC110527731 | LOC106582704 | coding | downstream | 847586 | 39315167 ~ 39369527 (-) |
| LOC110527728 | NA | coding | downstream | 989340 | 39211234 ~ 39227773 (-) |
| pkp1b | LOC106582715 | coding | upstream | 107080 | 40324506 ~ 40346140 (-) |
| smpd2b | smpd2 | coding | upstream | 130635 | 40348061 ~ 40360586 (-) |
| LOC110527745 | LOC106582716 | coding | upstream | 147877 | 40365303 ~ 40405801 (-) |
| LOC110527748 | tulp1 | coding | upstream | 200609 | 40418035 ~ 40439054 (-) |
| LOC110527750 | LOC106582617 | coding | upstream | 234959 | 40452385 ~ 40454645 (-) |
| G606559 | NA | non-coding | downstream | 25504 | 40191164 ~ 40191609 (-) |
| G606557 | NA | non-coding | downstream | 26795 | 40190091 ~ 40190318 (-) |
| G606550 | NA | non-coding | downstream | 35319 | 40181571 ~ 40181794 (-) |
| G606517 | NA | non-coding | downstream | 107791 | 40109083 ~ 40109322 (-) |
| G606216 | NA | non-coding | downstream | 250209 | 39966629 ~ 39966904 (-) |
| G606610 | NA | non-coding | upstream | 62201 | 40279627 ~ 40280031 (-) |
| G606613 | LOC106582712 | non-coding | upstream | 66807 | 40284233 ~ 40287398 (-) |
| G606817 | NA | non-coding | upstream | 190016 | 40407442 ~ 40407652 (-) |
| G606818 | NA | non-coding | upstream | 190621 | 40408047 ~ 40408318 (-) |
| G606821 | NA | non-coding | upstream | 192535 | 40409961 ~ 40410312 (-) |
| G606135 | NA | other | downstream | 375782 | 39838891 ~ 39841331 (-) |
| LOC110527723 | LOC106582696 | other | downstream | 1148285 | 39063005 ~ 39123578 (-) |
| G604484 | NA | other | downstream | 1577713 | 38584293 ~ 38639400 (-) |
| G604485 | NA | other | downstream | 1619594 | 38589155 ~ 38597519 (-) |
| G601245 | NA | other | downstream | 4455843 | 35760699 ~ 35761270 (-) |
| LOC110527741 | LOC106582711 | other | upstream | 6129 | 40135298 ~ 40275270 (-) |
| G606973 | NA | other | upstream | 411823 | 40629249 ~ 40629880 (-) |
| LOC110527764 | LOC106582736 | other | upstream | 939244 | 41156665 ~ 41348915 (-) |
| G607932 | NA | other | upstream | 943722 | 41161148 ~ 41163397 (-) |
| G608888 | LOC106582750 | other | upstream | 1727145 | 41944571 ~ 41951244 (-) |
