G606462


Basic Information

Item Value
gene id G606462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40220254 ~ 40220539 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU690584
atattcgtcgccagacccaatGGCtcacatcagctatctgagcagctaacagatcactgtagctgtacatagcccatctgtaaatagcccatccaatctacctacctcatcctcatattgtttttatttacttttctgctcttttgcacacgagtatttctacttgcacatcatcatctgcacatctatcactccagtgttaattttctaaattgtaattacttcgctactatggcctatttattgccttacctcctcatgccatttgcacacactgtatatagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU690584 True 286 lncRNA 0.40 1 40220254 40220539

Neighbor

gene id symbol gene type direction distance location
LOC110527739 LOC106582710 coding upstream 192796 39992766 ~ 40027458 (+)
LOC110527736 LOC106582707 coding upstream 446530 39433189 ~ 39773724 (+)
LOC110527735 LOC106582706 coding upstream 843398 39370730 ~ 39376856 (+)
LOC110527730 LOC106582703 coding upstream 910020 39291656 ~ 39310234 (+)
LOC110527729 LOC106582701 coding upstream 980046 39228701 ~ 39240208 (+)
csrp1b LOC106582712 coding downstream 63014 40283553 ~ 40287403 (+)
tnni1b LOC100462680 coding downstream 71501 40292040 ~ 40296179 (+)
tnnt2b LOC106582714 coding downstream 84583 40305122 ~ 40314447 (+)
LOC110527751 NA coding downstream 218340 40438879 ~ 40457742 (+)
LOC110527752 LOC106582721 coding downstream 253227 40473766 ~ 40481140 (+)
G606450 NA non-coding upstream 24149 40195901 ~ 40196105 (+)
G606442 NA non-coding upstream 32985 40186787 ~ 40187269 (+)
G606439 NA non-coding upstream 40752 40179181 ~ 40179502 (+)
G606436 LOC106582711 non-coding upstream 43307 40176650 ~ 40176947 (+)
G606400 LOC105027254 non-coding upstream 78282 40126534 ~ 40141972 (+)
G606464 LOC106582711 non-coding downstream 2488 40223027 ~ 40224171 (+)
G606466 NA non-coding downstream 7141 40227680 ~ 40227931 (+)
G606471 NA non-coding downstream 12514 40233053 ~ 40233361 (+)
G606483 NA non-coding downstream 29325 40249864 ~ 40250065 (+)
G606488 NA non-coding downstream 37344 40257883 ~ 40258232 (+)
G606452 LOC106582711 other upstream 13357 40206569 ~ 40206897 (+)
G604258 NA other upstream 1628960 38584474 ~ 38594822 (+)
G604207 NA other upstream 1720592 38499031 ~ 38499662 (+)
G602295 gli1 other upstream 3129498 37089624 ~ 37090756 (+)
G606469 NA other downstream 10346 40230885 ~ 40231225 (+)
G606977 NA other downstream 413642 40634181 ~ 40634439 (+)
G607904 NA other downstream 1242285 41462824 ~ 41463169 (+)

Expression


Co-expression Network