G606471


Basic Information

Item Value
gene id G606471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40233053 ~ 40233361 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU690596
GTACATAGGTATCGACACGCCTCAGTCATTACattttagaaacacctttggcagcgatacagctgtgagtctttctgggtaagtctctaagagatttgcacacctggattgtgcaatatttgcacattattcttcttaaaattcctcaagctctgtcaagttggttgttgatcattgctacacagtcattttcaagtcttgccaaagatcttcaagccgatttaagtcaaacctgtagctaggccactcaggaacatgcaATGTTGTCTCGGaatcaactccagtgtatatttggccttgtgttatagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU690596 True 309 lncRNA 0.41 1 40233053 40233361

Neighbor

gene id symbol gene type direction distance location
LOC110527739 LOC106582710 coding upstream 205595 39992766 ~ 40027458 (+)
LOC110527736 LOC106582707 coding upstream 459329 39433189 ~ 39773724 (+)
LOC110527735 LOC106582706 coding upstream 856197 39370730 ~ 39376856 (+)
LOC110527730 LOC106582703 coding upstream 922819 39291656 ~ 39310234 (+)
LOC110527729 LOC106582701 coding upstream 992845 39228701 ~ 39240208 (+)
csrp1b LOC106582712 coding downstream 50192 40283553 ~ 40287403 (+)
tnni1b LOC100462680 coding downstream 58679 40292040 ~ 40296179 (+)
tnnt2b LOC106582714 coding downstream 71761 40305122 ~ 40314447 (+)
LOC110527751 NA coding downstream 205518 40438879 ~ 40457742 (+)
LOC110527752 LOC106582721 coding downstream 240405 40473766 ~ 40481140 (+)
G606466 NA non-coding upstream 5122 40227680 ~ 40227931 (+)
G606464 LOC106582711 non-coding upstream 8882 40223027 ~ 40224171 (+)
G606462 NA non-coding upstream 12514 40220254 ~ 40220539 (+)
G606450 NA non-coding upstream 36948 40195901 ~ 40196105 (+)
G606442 NA non-coding upstream 45784 40186787 ~ 40187269 (+)
G606483 NA non-coding downstream 16503 40249864 ~ 40250065 (+)
G606488 NA non-coding downstream 24522 40257883 ~ 40258232 (+)
G606501 NA non-coding downstream 46361 40279722 ~ 40280032 (+)
G606502 NA non-coding downstream 48091 40281452 ~ 40281933 (+)
G606657 NA non-coding downstream 117935 40351296 ~ 40351759 (+)
G606469 NA other upstream 1828 40230885 ~ 40231225 (+)
G606452 LOC106582711 other upstream 26156 40206569 ~ 40206897 (+)
G606400 LOC105027254 other upstream 98603 40126534 ~ 40141972 (+)
G604258 NA other upstream 1641759 38584474 ~ 38594822 (+)
G606977 NA other downstream 400820 40634181 ~ 40634439 (+)
G607904 NA other downstream 1229463 41462824 ~ 41463169 (+)
G608390 LOC106582745 other downstream 1593850 41827211 ~ 41830808 (+)
G609436 NA other downstream 2587595 42820956 ~ 42821245 (+)

Expression


Co-expression Network