G606483


Basic Information

Item Value
gene id G606483
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40249864 ~ 40250065 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU690608
ctacagcgtacaatgacattctagaccacatatgtcagagtcaaggcccgcgggccacatccggcccgcaagaaggttttttacggcccctgggatgatcttgatttattattagaaccggcccgcagcaagccggcagcccgcagatcttttacacgcaccaatactacatttcccacaatgcaaaggtgacgcaccgagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU690608 True 202 lncRNA 0.53 1 40249864 40250065

Neighbor

gene id symbol gene type direction distance location
LOC110527739 LOC106582710 coding upstream 222406 39992766 ~ 40027458 (+)
LOC110527736 LOC106582707 coding upstream 476140 39433189 ~ 39773724 (+)
LOC110527735 LOC106582706 coding upstream 873008 39370730 ~ 39376856 (+)
LOC110527730 LOC106582703 coding upstream 939630 39291656 ~ 39310234 (+)
LOC110527729 LOC106582701 coding upstream 1009656 39228701 ~ 39240208 (+)
csrp1b LOC106582712 coding downstream 33488 40283553 ~ 40287403 (+)
tnni1b LOC100462680 coding downstream 41975 40292040 ~ 40296179 (+)
tnnt2b LOC106582714 coding downstream 55057 40305122 ~ 40314447 (+)
LOC110527751 NA coding downstream 188814 40438879 ~ 40457742 (+)
LOC110527752 LOC106582721 coding downstream 223701 40473766 ~ 40481140 (+)
G606471 NA non-coding upstream 16503 40233053 ~ 40233361 (+)
G606466 NA non-coding upstream 21933 40227680 ~ 40227931 (+)
G606464 LOC106582711 non-coding upstream 25693 40223027 ~ 40224171 (+)
G606462 NA non-coding upstream 29325 40220254 ~ 40220539 (+)
G606450 NA non-coding upstream 53759 40195901 ~ 40196105 (+)
G606488 NA non-coding downstream 7818 40257883 ~ 40258232 (+)
G606501 NA non-coding downstream 29657 40279722 ~ 40280032 (+)
G606502 NA non-coding downstream 31387 40281452 ~ 40281933 (+)
G606657 NA non-coding downstream 101231 40351296 ~ 40351759 (+)
G606670 NA non-coding downstream 108760 40358825 ~ 40360516 (+)
G606469 NA other upstream 18639 40230885 ~ 40231225 (+)
G606452 LOC106582711 other upstream 42967 40206569 ~ 40206897 (+)
G606400 LOC105027254 other upstream 115414 40126534 ~ 40141972 (+)
G604258 NA other upstream 1658570 38584474 ~ 38594822 (+)
G606977 NA other downstream 384116 40634181 ~ 40634439 (+)
G607904 NA other downstream 1212759 41462824 ~ 41463169 (+)
G608390 LOC106582745 other downstream 1577146 41827211 ~ 41830808 (+)
G609436 NA other downstream 2570891 42820956 ~ 42821245 (+)

Expression


Co-expression Network