G606670


Basic Information

Item Value
gene id G606670
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40358825 ~ 40360516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU690815
TTGAGGGAGAAGACTCGGAGCCTGATGGTGTTGCTGTCAGCCATGGTTATAGGAATAAATGAACAGTGATGGCAGACTTCAACGGTGGTCAATGCCTGCCTGTGTGGTTAGGCTAGTCCCTGTGTAGCAGCTGAGGTTAGTCCCTGCTGTGTGGATGAAGCCACATCCCTGGTTAGAATCAGCAGTGAGGTCTATGACTGGAACTCCTGGCAGCACTCAATCATTAACCCACACAGTCCAACAACGCAGCGGGCCACCacactcactgtctgtctcctctcttgcaGGGGGGCATAGCAGACTGACCAAGCCTAAGCCAACACACTGCTGACATAGGAGACACACTGACACAGGACAGAAGAATGACAGCCGGTGAAAAGACCAGGAGGGTTACGTTAGAATGAGAGGCCTTCCACTGAATACAAAGGGTGGGCCTAAGCTTAACCCAGTGTCAATACTCATTACCATAgtcaaaaaaagaaaaacacattcCTAAAATAGGTATTTTCTTTGTTTAATAGGTAGGCCATACAAACATCAGGTGAATCCAAAACTGGTTGTATATACCCATAATTTATGTATGTTTTAATATGTGATGATTGGCCTAAGTGAATTGAAACTAttgttaataaaaataaaataaaaatgtgttaccAAACACACAAAGTACCTGATTTGTCAATTTGCGCATGCAATAatgtaactagctaacgttagctatgtaTTCAAAACAGATAACCTTGCAGGCAACATACGTTGATGATCCTAAAGTTAGACACAGCCAACTGCCTTCCCTAGGCGACAGATAGCAATATATattgctgaaaagagaagaggtTTTACAATATGAGTTAAATTCTTAGCTAGGCGCCAGAGAGCTCGAGAGACATCGTTCTACCGGGAGGAGTAGGACTGTCTCGAGACCAGATTGCTACCCTTAGCAGGCTAATTGACCACCACTACAGCTCGTTTGCAATGACAACCAGAGACAATCTATCGAAGTTAGTACACCCACCATCAACATGGCTAGCTAACACAACATTAGCTaggctttagctagctagctaaatgcctGTTTTGCTTTATGTTGTGCTTTATGTAGCTAGCAGGCTTTGACTTTCATGACACAGAAACAGACCCTTACTGTTAACTGTTTATAgactctagctagctaacattagttacATAAATGGAGCAGATGGGTGACAACTTGGTGCGAGTTAACTTTAACAATGATCCAACGTTATCAAGCAAGGAATTTAttttagctagatagccaatggtTTCAATGAATTTACCAACCTTTACAAGCAGGCTTACTAGCAAGTTCCGTGTGGCTGCAATTGGTCACATGTCGCGTGCTGACAAGTCAAGAAAACAGGGTGATACTTTTGCAACCCTGTTCGTCATAATACCTTACTTTGGATTTTGTATTATTTACTGACAAATAGATTGTTTCCAGCCAAGGCAGTTTTCCCATCGCTGCTGTGCTTGACCAAAGATGATGAATATTCTGACAAGATACATgtctctccgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU690815 True 1537 lncRNA 0.42 2 40358825 40360516

Neighbor

gene id symbol gene type direction distance location
tnnt2b LOC106582714 coding upstream 44378 40305122 ~ 40314447 (+)
tnni1b LOC100462680 coding upstream 62646 40292040 ~ 40296179 (+)
csrp1b LOC106582712 coding upstream 71422 40283553 ~ 40287403 (+)
LOC110527739 LOC106582710 coding upstream 331367 39992766 ~ 40027458 (+)
LOC110527736 LOC106582707 coding upstream 585101 39433189 ~ 39773724 (+)
LOC110527751 NA coding downstream 78363 40438879 ~ 40457742 (+)
LOC110527752 LOC106582721 coding downstream 113250 40473766 ~ 40481140 (+)
LOC110527753 NA coding downstream 133137 40493653 ~ 40506453 (+)
ngfb LOC106582728 coding downstream 322490 40683006 ~ 40707849 (+)
tspan2a LOC106582727 coding downstream 355411 40715927 ~ 40733584 (+)
G606657 NA non-coding upstream 7066 40351296 ~ 40351759 (+)
G606502 NA non-coding upstream 76892 40281452 ~ 40281933 (+)
G606501 NA non-coding upstream 78793 40279722 ~ 40280032 (+)
G606488 NA non-coding upstream 100593 40257883 ~ 40258232 (+)
G606483 NA non-coding upstream 108760 40249864 ~ 40250065 (+)
G606700 NA non-coding downstream 54224 40414740 ~ 40417069 (+)
G606705 NA non-coding downstream 69101 40429617 ~ 40429902 (+)
G606708 NA non-coding downstream 72757 40433273 ~ 40433521 (+)
G606662 NA non-coding downstream 88940 40449456 ~ 40449830 (+)
G606730 NA non-coding downstream 120963 40481479 ~ 40481775 (+)
G606469 NA other upstream 127600 40230885 ~ 40231225 (+)
G606464 LOC106582711 other upstream 134654 40223027 ~ 40224171 (+)
G606452 LOC106582711 other upstream 151928 40206569 ~ 40206897 (+)
G606400 LOC105027254 other upstream 224375 40126534 ~ 40141972 (+)
G604258 NA other upstream 1767531 38584474 ~ 38594822 (+)
G606977 NA other downstream 273665 40634181 ~ 40634439 (+)
G607904 NA other downstream 1102308 41462824 ~ 41463169 (+)
G608390 LOC106582745 other downstream 1466695 41827211 ~ 41830808 (+)
G609436 NA other downstream 2460440 42820956 ~ 42821245 (+)

Expression


Co-expression Network