Gene
RNA
| Item | Value |
|---|---|
| gene id | G606821 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 40409961 ~ 40410312 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU691017 | True | 352 | lncRNA | 0.40 | 1 | 40409961 | 40410312 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527745 | LOC106582716 | coding | downstream | 4160 | 40365303 ~ 40405801 (-) |
| smpd2b | smpd2 | coding | downstream | 49375 | 40348061 ~ 40360586 (-) |
| pkp1b | LOC106582715 | coding | downstream | 63821 | 40324506 ~ 40346140 (-) |
| LOC110527741 | LOC106582711 | coding | downstream | 134691 | 40135298 ~ 40275270 (-) |
| LOC110527740 | LOC100194559 | coding | downstream | 275488 | 40115587 ~ 40134473 (-) |
| LOC110527748 | tulp1 | coding | upstream | 7723 | 40418035 ~ 40439054 (-) |
| LOC110527750 | LOC106582617 | coding | upstream | 42073 | 40452385 ~ 40454645 (-) |
| LOC110527754 | LOC106582722 | coding | upstream | 97430 | 40507742 ~ 40513295 (-) |
| LOC110527755 | LOC106582604 | coding | upstream | 150046 | 40560358 ~ 40562952 (-) |
| LOC110527756 | LOC106582724 | coding | upstream | 175596 | 40585908 ~ 40596388 (-) |
| G606818 | NA | non-coding | downstream | 1643 | 40408047 ~ 40408318 (-) |
| G606817 | NA | non-coding | downstream | 2309 | 40407442 ~ 40407652 (-) |
| G606613 | LOC106582712 | non-coding | downstream | 122563 | 40284233 ~ 40287398 (-) |
| G606610 | NA | non-coding | downstream | 129930 | 40279627 ~ 40280031 (-) |
| G606570 | NA | non-coding | downstream | 192535 | 40217113 ~ 40217426 (-) |
| G606828 | NA | non-coding | upstream | 19156 | 40429468 ~ 40429703 (-) |
| G606833 | NA | non-coding | upstream | 24468 | 40434780 ~ 40435070 (-) |
| G606797 | NA | non-coding | upstream | 30632 | 40440944 ~ 40441262 (-) |
| G606835 | NA | non-coding | upstream | 31536 | 40441848 ~ 40443196 (-) |
| G606836 | NA | non-coding | upstream | 32942 | 40443254 ~ 40443607 (-) |
| G606135 | NA | other | downstream | 568630 | 39838891 ~ 39841331 (-) |
| LOC110527723 | LOC106582696 | other | downstream | 1341133 | 39063005 ~ 39123578 (-) |
| G604484 | NA | other | downstream | 1770561 | 38584293 ~ 38639400 (-) |
| G604485 | NA | other | downstream | 1812442 | 38589155 ~ 38597519 (-) |
| G606973 | NA | other | upstream | 218937 | 40629249 ~ 40629880 (-) |
| LOC110527764 | LOC106582736 | other | upstream | 746358 | 41156665 ~ 41348915 (-) |
| G607932 | NA | other | upstream | 750836 | 41161148 ~ 41163397 (-) |
| G608888 | LOC106582750 | other | upstream | 1534259 | 41944571 ~ 41951244 (-) |
| G608900 | NA | other | upstream | 1558257 | 41968569 ~ 42025704 (-) |
