G606705


Basic Information

Item Value
gene id G606705
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40429617 ~ 40429902 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU690853
GGCTCATATggtgtgaatggaatggtatccaacacatggaaaccatgtgtttgatgagtTTGATACTATTCCATTGATTCCGTTCATGCCATcactatgagcctgtcctccccaattaaagtgccaccaacctcctgtgattcaGCACTTGCGGTATACAGTGCTGTAGGCCACACACAGTATACATCTGCAGACTGCACCTGTCTGTGTCTCAACAGTAAATCAGTATTCAAGCTATTGAATGAAAGACGcctcctctctcgcctctcctctccgtATGCCCCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU690853 True 286 lncRNA 0.47 1 40429617 40429902

Neighbor

gene id symbol gene type direction distance location
tnnt2b LOC106582714 coding upstream 115170 40305122 ~ 40314447 (+)
tnni1b LOC100462680 coding upstream 133438 40292040 ~ 40296179 (+)
csrp1b LOC106582712 coding upstream 142214 40283553 ~ 40287403 (+)
LOC110527739 LOC106582710 coding upstream 402159 39992766 ~ 40027458 (+)
LOC110527736 LOC106582707 coding upstream 655893 39433189 ~ 39773724 (+)
LOC110527751 NA coding downstream 8977 40438879 ~ 40457742 (+)
LOC110527752 LOC106582721 coding downstream 43864 40473766 ~ 40481140 (+)
LOC110527753 NA coding downstream 63751 40493653 ~ 40506453 (+)
ngfb LOC106582728 coding downstream 253104 40683006 ~ 40707849 (+)
tspan2a LOC106582727 coding downstream 286025 40715927 ~ 40733584 (+)
G606700 NA non-coding upstream 12548 40414740 ~ 40417069 (+)
G606670 NA non-coding upstream 69101 40358825 ~ 40360516 (+)
G606657 NA non-coding upstream 77858 40351296 ~ 40351759 (+)
G606502 NA non-coding upstream 147684 40281452 ~ 40281933 (+)
G606501 NA non-coding upstream 149585 40279722 ~ 40280032 (+)
G606708 NA non-coding downstream 3371 40433273 ~ 40433521 (+)
G606662 NA non-coding downstream 19554 40449456 ~ 40449830 (+)
G606730 NA non-coding downstream 51577 40481479 ~ 40481775 (+)
G606732 NA non-coding downstream 55970 40485872 ~ 40486080 (+)
G606734 NA non-coding downstream 57537 40487439 ~ 40487693 (+)
G606469 NA other upstream 198392 40230885 ~ 40231225 (+)
G606464 LOC106582711 other upstream 205446 40223027 ~ 40224171 (+)
G606452 LOC106582711 other upstream 222720 40206569 ~ 40206897 (+)
G606400 LOC105027254 other upstream 295167 40126534 ~ 40141972 (+)
G604258 NA other upstream 1838323 38584474 ~ 38594822 (+)
G606977 NA other downstream 204279 40634181 ~ 40634439 (+)
G607904 NA other downstream 1032922 41462824 ~ 41463169 (+)
G608390 LOC106582745 other downstream 1397309 41827211 ~ 41830808 (+)
G609436 NA other downstream 2391054 42820956 ~ 42821245 (+)

Expression


Co-expression Network