G606836



Basic Information


Item Value
gene id G606836
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40443254 ~ 40443607 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU691032
CCAGACTTACACCATCGCAACAACGGCTAGATACAGAACTCAAGTTTTCAATTCGGAGAAATGTCCAGATACAGGTCTAATGCCAATGCAGTAAAATACTTAGAGTGTTTGTGTGCTGCTCCAGCTAATGAAGATGATCATCTCACTAggtttggggtggcagggtagcctagtggttagtaaccgaaaggttgcaagttcaaatccctgagctgacaaggtacaaatctgtcgttctgcccctgaacccactgttcctaggccgtcattgaaaataataatttgttcttaactgacttgcctagttaaaaaaatgttgctttttttTAAAGTGACATGTCCTGTATATTTTTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU691032 True 354 lncRNA 0.41 1 40443254 40443607

Neighbor


gene id symbol gene type direction distance location
LOC110527748 tulp1 coding downstream 4200 40418035 ~ 40439054 (-)
LOC110527745 LOC106582716 coding downstream 37453 40365303 ~ 40405801 (-)
smpd2b smpd2 coding downstream 82668 40348061 ~ 40360586 (-)
pkp1b LOC106582715 coding downstream 97114 40324506 ~ 40346140 (-)
LOC110527741 LOC106582711 coding downstream 167984 40135298 ~ 40275270 (-)
LOC110527750 LOC106582617 coding upstream 8778 40452385 ~ 40454645 (-)
LOC110527754 LOC106582722 coding upstream 64135 40507742 ~ 40513295 (-)
LOC110527755 LOC106582604 coding upstream 116751 40560358 ~ 40562952 (-)
LOC110527756 LOC106582724 coding upstream 142301 40585908 ~ 40596388 (-)
LOC110527758 LOC105008416 coding upstream 159844 40603451 ~ 40612049 (-)
G606835 NA non-coding downstream 58 40441848 ~ 40443196 (-)
G606797 NA non-coding downstream 1992 40440944 ~ 40441262 (-)
G606833 NA non-coding downstream 8184 40434780 ~ 40435070 (-)
G606828 NA non-coding downstream 13551 40429468 ~ 40429703 (-)
G606821 NA non-coding downstream 32942 40409961 ~ 40410312 (-)
G606837 NA non-coding upstream 327 40443934 ~ 40444313 (-)
G606838 NA non-coding upstream 1063 40444670 ~ 40444925 (-)
G606839 NA non-coding upstream 1420 40445027 ~ 40445820 (-)
G606840 NA non-coding upstream 2390 40445997 ~ 40447246 (-)
G606841 NA non-coding upstream 3922 40447529 ~ 40447984 (-)
G606135 NA other downstream 601923 39838891 ~ 39841331 (-)
LOC110527723 LOC106582696 other downstream 1374426 39063005 ~ 39123578 (-)
G604484 NA other downstream 1803854 38584293 ~ 38639400 (-)
G604485 NA other downstream 1845735 38589155 ~ 38597519 (-)
G606973 NA other upstream 185642 40629249 ~ 40629880 (-)
LOC110527764 LOC106582736 other upstream 713063 41156665 ~ 41348915 (-)
G607932 NA other upstream 717541 41161148 ~ 41163397 (-)
G608888 LOC106582750 other upstream 1500964 41944571 ~ 41951244 (-)
G608900 NA other upstream 1524962 41968569 ~ 42025704 (-)

Expression



Co-expression Network