G606748


Basic Information

Item Value
gene id G606748
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40517691 ~ 40517931 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU690897
CAGGAACCACAAACAGTATTTGCCAATATCATAACTGAAACTGCAGCTGGACGTCTTTGGAGCTGAAGATTGAGGCCAGCTTTTGTATGCTAGCGTACACTCTTTAACAGTTTCACTGGTTGAAAACACAGCAAGAAAACACACAGGCCACTATTACATATTGGCCTattttgttgcagtattggtGGTGGTTGGTTGAACAACAACTTGTTTTACTAGAGGGAAAAATAAAACGGAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU690897 True 241 lncRNA 0.40 1 40517691 40517931

Neighbor

gene id symbol gene type direction distance location
LOC110527753 NA coding upstream 11238 40493653 ~ 40506453 (+)
LOC110527752 LOC106582721 coding upstream 36551 40473766 ~ 40481140 (+)
LOC110527751 NA coding upstream 59949 40438879 ~ 40457742 (+)
tnnt2b LOC106582714 coding upstream 203244 40305122 ~ 40314447 (+)
tnni1b LOC100462680 coding upstream 221512 40292040 ~ 40296179 (+)
ngfb LOC106582728 coding downstream 165075 40683006 ~ 40707849 (+)
tspan2a LOC106582727 coding downstream 197996 40715927 ~ 40733584 (+)
LOC110527761 LOC106582730 coding downstream 250348 40768279 ~ 40778071 (+)
si:ch211-105j21.9 LOC106582731 coding downstream 260811 40778742 ~ 40783217 (+)
ppm1j LOC106582733 coding downstream 843258 41361189 ~ 41411312 (+)
G606737 NA non-coding upstream 27839 40489494 ~ 40489852 (+)
G606736 NA non-coding upstream 29420 40488035 ~ 40488271 (+)
G606734 NA non-coding upstream 29998 40487439 ~ 40487693 (+)
G606732 NA non-coding upstream 31611 40485872 ~ 40486080 (+)
G606730 NA non-coding upstream 35916 40481479 ~ 40481775 (+)
G606749 NA non-coding downstream 1394 40519325 ~ 40519619 (+)
G606666 NA non-coding downstream 3166 40521097 ~ 40550304 (+)
G606753 NA non-coding downstream 13319 40531250 ~ 40531986 (+)
G606757 NA non-coding downstream 36254 40554185 ~ 40554421 (+)
G606760 NA non-coding downstream 39845 40557776 ~ 40558028 (+)
G606469 NA other upstream 286466 40230885 ~ 40231225 (+)
G606464 LOC106582711 other upstream 293520 40223027 ~ 40224171 (+)
G606452 LOC106582711 other upstream 310794 40206569 ~ 40206897 (+)
G606400 LOC105027254 other upstream 383241 40126534 ~ 40141972 (+)
G606977 NA other downstream 116250 40634181 ~ 40634439 (+)
G607904 NA other downstream 944893 41462824 ~ 41463169 (+)
G608390 LOC106582745 other downstream 1309280 41827211 ~ 41830808 (+)
G609436 NA other downstream 2303025 42820956 ~ 42821245 (+)
G610436 NA other downstream 2892460 43410391 ~ 43410806 (+)

Expression


Co-expression Network