G606666


Basic Information

Item Value
gene id G606666
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40521097 ~ 40550304 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU690811
GAACTTTCACATCAGGACATAGTGAACTAGGCCTACCATATAGGCTAAGCCTAAACCTTTAGGGCTGAAGAAACAAAAAACAGGTATTTTTCATTTTGGGTAGGGTCTTTATGAAGATGCAACATGTCTGACTGATGCAACATGTCCCAGCATGTTCCCACGCAATGCTGTGCAACTGAGGAAATGCCACACCAAGAGGAAGAGAGATTTCCAGGCAGAAATGTCTGACAGCGGCCTCAACCGTGACCTGGAAAAATTTGCCCCTaactgagagagatggagaacattTGTCAACGGACAATGCTTCTTATAGGCGCCAAGGTTAAGTCAAggcctgagccctaggaccatgccccaggactacctggcctgatgattcctggctgtccccagtccacctggtcgtgctgctgctccagtttaaactgttctgcctgcggctatggaaccctgacctgttcaccggatgtgcaaCCTTGTCCCTTGTCTACaaacactgtgattattatttgaccctgctggtcatctatgaacatttgaaaatcttAAAAAACAATCTgtccttaatggccatgtactcttataatctccacccggcacagccagtagaggactggccacccctcagagcttgGTACCTCTCTAGGTTTCTCTGTAAGGAGTTTTTAATTATCACCGcaatctgcattgcttgctgtttggggttttaggctgggtttctg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU690811 True 722 lncRNA 0.47 2 40521097 40550304

Neighbor

gene id symbol gene type direction distance location
LOC110527753 NA coding upstream 14644 40493653 ~ 40506453 (+)
LOC110527752 LOC106582721 coding upstream 39957 40473766 ~ 40481140 (+)
LOC110527751 NA coding upstream 63355 40438879 ~ 40457742 (+)
tnnt2b LOC106582714 coding upstream 206650 40305122 ~ 40314447 (+)
tnni1b LOC100462680 coding upstream 224918 40292040 ~ 40296179 (+)
ngfb LOC106582728 coding downstream 132702 40683006 ~ 40707849 (+)
tspan2a LOC106582727 coding downstream 165623 40715927 ~ 40733584 (+)
LOC110527761 LOC106582730 coding downstream 217975 40768279 ~ 40778071 (+)
si:ch211-105j21.9 LOC106582731 coding downstream 228438 40778742 ~ 40783217 (+)
ppm1j LOC106582733 coding downstream 810885 41361189 ~ 41411312 (+)
G606749 NA non-coding upstream 1478 40519325 ~ 40519619 (+)
G606748 NA non-coding upstream 3166 40517691 ~ 40517931 (+)
G606737 NA non-coding upstream 31245 40489494 ~ 40489852 (+)
G606736 NA non-coding upstream 32826 40488035 ~ 40488271 (+)
G606734 NA non-coding upstream 33404 40487439 ~ 40487693 (+)
G606757 NA non-coding downstream 3881 40554185 ~ 40554421 (+)
G606760 NA non-coding downstream 7472 40557776 ~ 40558028 (+)
G606761 NA non-coding downstream 8680 40558984 ~ 40559651 (+)
G606765 NA non-coding downstream 14020 40564324 ~ 40564647 (+)
G606771 NA non-coding downstream 25959 40576263 ~ 40576493 (+)
G606469 NA other upstream 289872 40230885 ~ 40231225 (+)
G606464 LOC106582711 other upstream 296926 40223027 ~ 40224171 (+)
G606452 LOC106582711 other upstream 314200 40206569 ~ 40206897 (+)
G606400 LOC105027254 other upstream 386647 40126534 ~ 40141972 (+)
G606977 NA other downstream 83877 40634181 ~ 40634439 (+)
G607904 NA other downstream 912520 41462824 ~ 41463169 (+)
G608390 LOC106582745 other downstream 1276907 41827211 ~ 41830808 (+)
G609436 NA other downstream 2270652 42820956 ~ 42821245 (+)
G610436 NA other downstream 2860087 43410391 ~ 43410806 (+)

Expression


Co-expression Network