G606761


Basic Information

Item Value
gene id G606761
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40558984 ~ 40559651 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU690911
ggggagccaggccattaaggatcttgaatacaagacatgcgtcggtgtattgcacaagattttcccaactcaagagctcatgctttctaaggatgtgacaatgatgatggctattgggcttcctatcaagcactttgagagcctgtttgtagacagactgaataggttttaatgttgtacagcaagcttgggcccaactagtcaagcagtatgttaagtgggggagtatcatagatttgaagtacaattttgctacctctgtagtcaaacaatttcgtataaatcggaaattagctaggttgaatttggttatttgaattacctttttcacatgctttttaaaagagaggttggaatcaagtatgatgccaaggtacttaaaatcggataccacctggagcttctcccctgacacatagacatctggctcagtagcatctgttgccccctttgtgaagaacatgcaaacagtttttttcacattgagatgcaaacacgagtcactgagccactttgtaacctggaccattacagtagtgagttcttgtgcagcttgttgtttgctctttgcatgcacatatatcactgtatcatctgcatacatttgaacttcagacccagtacagacagaaggcagatcattaatgtacaggctgaacaggaggggc
>TU690912
agattttcccaactcaagagctcatgctttctaaggatgtgacaatgatgatggctattgggcttcctatcaagcactttgagagcctgtttgtagacagactgaataggttttaatgttgtacagcaagcttgggcccaactagtcaagcagtatgttaagtgggggagtatcatagatttgaagtacaattttgctacctctgtagtcaaacaatttcgtataaatcggaaattagctaggttgaatttggttatttgaattacctttttcacatgctttttaaaagagaggttggaatcaagtatgatgccaaggtacttaaaatcggataccacctggagcttctcccctgacacatagacatctgg
>TU690916
agattttcccaactcaagagctcatgctttctaaggatgtgacaatgatgatggctattgggcttcctatcaagcactttgagagcctgtttgtagacagactgaataggttttaatgttgtacagcaagcttgggcccaactagtcaagcagtatgttaagtgggggagtatcatagatttgaagtacaattttgctacctctgtagtcaaacaatttcgtataaatcggaaattagctaggttgaatttggttatttgaattacctttttcacatgctttttaaaagagaggttggaatcaagtatgatgccaaggtacttaaaatcggataccacctggagcttctcccctgacacatagacatctggctcagtagcatctgttgccccctttgtgaagaacatgcaaacagtttttttcacattgagatgcaaacacga
>TU690914
gactgaataggttttaatgttgtacagcaagcttgggcccaactagtcaagcagtatgttaagtgggggagtatcatagatttgaagtacaattttgctacctctgtagtcaaacaatttcgtataaatcggaaattagctaggttgaatttggttatttgaattacctttttcacatgctttttaaaagagaggttggaatcaagtatgatgccaaggtacttaaaatcggataccacctggagcttctcccctgacacatagacatctgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU690911 False 668 lncRNA 0.42 1 40558984 40559651
TU690912 False 371 lncRNA 0.39 1 40559040 40559410
TU690916 False 443 lncRNA 0.40 1 40559040 40559482
TU690914 True 272 lncRNA 0.38 1 40559139 40559410

Neighbor

gene id symbol gene type direction distance location
LOC110527753 NA coding upstream 52531 40493653 ~ 40506453 (+)
LOC110527752 LOC106582721 coding upstream 77844 40473766 ~ 40481140 (+)
LOC110527751 NA coding upstream 101242 40438879 ~ 40457742 (+)
tnnt2b LOC106582714 coding upstream 244537 40305122 ~ 40314447 (+)
tnni1b LOC100462680 coding upstream 262805 40292040 ~ 40296179 (+)
ngfb LOC106582728 coding downstream 123355 40683006 ~ 40707849 (+)
tspan2a LOC106582727 coding downstream 156276 40715927 ~ 40733584 (+)
LOC110527761 LOC106582730 coding downstream 208628 40768279 ~ 40778071 (+)
si:ch211-105j21.9 LOC106582731 coding downstream 219091 40778742 ~ 40783217 (+)
ppm1j LOC106582733 coding downstream 801538 41361189 ~ 41411312 (+)
G606760 NA non-coding upstream 956 40557776 ~ 40558028 (+)
G606757 NA non-coding upstream 4563 40554185 ~ 40554421 (+)
G606666 NA non-coding upstream 8680 40521097 ~ 40550304 (+)
G606753 NA non-coding upstream 26998 40531250 ~ 40531986 (+)
G606749 NA non-coding upstream 39365 40519325 ~ 40519619 (+)
G606765 NA non-coding downstream 4673 40564324 ~ 40564647 (+)
G606771 NA non-coding downstream 16612 40576263 ~ 40576493 (+)
G606779 LOC106582724 non-coding downstream 26479 40586130 ~ 40593441 (+)
G606782 NA non-coding downstream 36323 40595974 ~ 40596343 (+)
G606787 NA non-coding downstream 44575 40604226 ~ 40604765 (+)
G606469 NA other upstream 327759 40230885 ~ 40231225 (+)
G606464 LOC106582711 other upstream 334813 40223027 ~ 40224171 (+)
G606452 LOC106582711 other upstream 352087 40206569 ~ 40206897 (+)
G606400 LOC105027254 other upstream 424534 40126534 ~ 40141972 (+)
G606977 NA other downstream 74530 40634181 ~ 40634439 (+)
G607904 NA other downstream 903173 41462824 ~ 41463169 (+)
G608390 LOC106582745 other downstream 1267560 41827211 ~ 41830808 (+)
G609436 NA other downstream 2261305 42820956 ~ 42821245 (+)
G610436 NA other downstream 2850740 43410391 ~ 43410806 (+)

Expression


Co-expression Network