G606971


Basic Information

Item Value
gene id G606971
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40628233 ~ 40628504 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU691180
tgaggttgaagaggcgctgctgcgccttcttcacgatactgtctgtgtgagtggaccaattcagtttgtctgtgatgtgtatgccgaggaacttaaaacttgctaccctctccactactgttccatcaatgtggataggggggtgttccctctgctgtttcctgaagtccacaatcatctccttagttttgttgacgttgagtgtgaggttgttttcctgacaccacactccgagggccctcacctcctccctgtaggccgtctcatcgttg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU691180 True 272 lncRNA 0.51 1 40628233 40628504

Neighbor

gene id symbol gene type direction distance location
LOC110527753 NA coding upstream 121780 40493653 ~ 40506453 (+)
LOC110527752 LOC106582721 coding upstream 147093 40473766 ~ 40481140 (+)
LOC110527751 NA coding upstream 170491 40438879 ~ 40457742 (+)
tnnt2b LOC106582714 coding upstream 313786 40305122 ~ 40314447 (+)
tnni1b LOC100462680 coding upstream 332054 40292040 ~ 40296179 (+)
ngfb LOC106582728 coding downstream 54502 40683006 ~ 40707849 (+)
tspan2a LOC106582727 coding downstream 87423 40715927 ~ 40733584 (+)
LOC110527761 LOC106582730 coding downstream 139775 40768279 ~ 40778071 (+)
si:ch211-105j21.9 LOC106582731 coding downstream 150238 40778742 ~ 40783217 (+)
ppm1j LOC106582733 coding downstream 732685 41361189 ~ 41411312 (+)
G606970 NA non-coding upstream 550 40627389 ~ 40627683 (+)
G606787 NA non-coding upstream 23468 40604226 ~ 40604765 (+)
G606782 NA non-coding upstream 31890 40595974 ~ 40596343 (+)
G606779 LOC106582724 non-coding upstream 34792 40586130 ~ 40593441 (+)
G606771 NA non-coding upstream 51740 40576263 ~ 40576493 (+)
G606972 NA non-coding downstream 1029 40629533 ~ 40629879 (+)
G606984 NA non-coding downstream 9990 40638494 ~ 40638766 (+)
G606990 NA non-coding downstream 18365 40646869 ~ 40647107 (+)
G607034 NA non-coding downstream 84235 40712739 ~ 40712962 (+)
G607025 NA non-coding downstream 157726 40786230 ~ 40787999 (+)
G606469 NA other upstream 397008 40230885 ~ 40231225 (+)
G606464 LOC106582711 other upstream 404062 40223027 ~ 40224171 (+)
G606452 LOC106582711 other upstream 421336 40206569 ~ 40206897 (+)
G606400 LOC105027254 other upstream 493783 40126534 ~ 40141972 (+)
G606977 NA other downstream 5677 40634181 ~ 40634439 (+)
G607904 NA other downstream 834320 41462824 ~ 41463169 (+)
G608390 LOC106582745 other downstream 1198707 41827211 ~ 41830808 (+)
G609436 NA other downstream 2192452 42820956 ~ 42821245 (+)
G610436 NA other downstream 2781887 43410391 ~ 43410806 (+)

Expression


Co-expression Network