G607218


Basic Information

Item Value
gene id G607218
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 40782789 ~ 40787940 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU691442
tttgtcattatggggtatggtgtatagattgatgaggaaaaaaacatatttaatcaaaTGTAgtatacggctgtaacgtaacaaaatgtgtaaaaagtgaaggggtctgaatactttccgaatgcactgtatatacactgagtgtagaaaacataAGGAACACCTTCATAATATCGAGTTTCAACCCCTTTTGTCCtaagaacagtctcaattcgtcgggcatggactctacaagtaggtcgaaagcattccatagggatgctggcccatgtttactcaatgcttccaacagttgtgtcaacttggatagatgtcctttgggttgtggaccattcttgttacacacgggaaactgtggaacatgaaaaacccagcagcgttgcagttcttgacacactcaaactagtttgcctggcacctactaccataacccgttcaaaggaatttaaatattttgtcttgcccattcaccctctaaatgtcacacatacacaatccatgtctcaagtcttaacaatccttctttaacctgtgcCCTCccgtttatctacactgattgaagtggatttaacaggtgacattaataagggatcataactttaacctggattcacctggtcagactGTCAAGGAGAAAGCAAATGTtcctcatgttttgtacacttagtgtaaaATCTGTTTCAAGTATCCTCCTTTTTACAGAGTTGGCTACGATTTCAATTCCATCCTCCAGAAAAGGAAGATCTAATTTACAGGaaataatagaataataatagaataatattAACTCCAATTTACTGATACAGAAAAATCATGAACAAAAATTGTAAACTTATGTCACACAGGCATACTAACAACAGTGTATGGAGGTATATGCTCAATCCAAAATTATAACCAACTCATTGCAGCACTGCCACAAAATGGGAAGAGACCAttactttttgaagaaattaaaGAATGAATCTGTCTGCCACCCATTCAAAATCATAAATGGTTTAAAATGAGTAGTGTAAATCGAAAAATGTATCAGTCAAAGTGTTTGACAGCAATACCGTATAAAATTCAAGTCATATGAGAACAGGCTTTTGATGGCTCAATACCTTGGCATCGGGTCTATgaattgatatataaaacaacaaTTGACACATCAATCAATTCTTTTAAATTTAAGCTATAGTATAAAATACTTGCTACAAAATGAATGCTCAATATATTGCCTTGTGCAGACTGTCATGAGGACACAGAATCTATAGAACATATTTTATGGTACAGTCTATTGGTGGCTCGAATTTGGAGTCAGGCCCAGGAATGGTTGTTCAGTCTTAATGTCTGTGTTCAGCAGGACCTGCAACCTGCATTGTTAAGGGATCTGAAAAACCACAATCAGTCAATGCAAAATATCATTATGCTCCTAGGTAAAGTATACATTTTTAGGGCAATATCGGTAGAAATCTTAAATTAGGGAAGTTCAGGACCCTCGTAAGACATCATAGTAAAATGAAGGGATGTATTGtaaaagaaaatagaaaaaatggcATTATACTGGGAAAAATGGGTTAATATGTGGACATCGGAGGGTTGGAGTTGGCCGCTGTGGGTGAAAATCCAACACTTGAAGAAAGAGGAAGTTaggaatatatacagGTATCATAGAGCGAAATAACTGCAAGTAGCGGTAtaagtattgttgtccattagcTGAATCCAATTAGGCTAGGGATGGAATGGTAGAGTGAAAAAAGTACTAAgaagaaaaaatacaaataatatacatacaaaaaatgtatacagttgaagtatgaagtttacatgcacaaatacatttaacctcagtttttcacaattcctgacatttaatcctattaaatatttcctgttttaggtcacttaggaccaccactttattttaataatgcgaaatgtcagaataatagtagagagaacatttttcagattgtatttctttcatcacattcccagtgggtcagaagtttacatacactcaattagtatttggtagcattgcctttaaatggtttagcttggctcaaacgttttgggtagccttccacaagcttcccacaataagttgggtgaatgttggcccatttctcctgataGAGCtagtgtaaccgagtcaggtttgtaggcctccttgctcgcacacacttttccagttctgcccacagattttatatataattgaggtcagggctttgtgatagccactccaataccttgactttgttgtccttaagccattttgccacaactttggaagtatgcttggggtcattgtccatttggaagacccatttgtgaccaagctttaacttcctgactgatgtcttgagatgttgcttcaatatatccacgtaaatgtcctccctcatgatgccatatcttttgtgaagtgcacctgtccctcctgcagcaaagcacccccacaacatgtgcttattggttgggatggtgttcttcagcttgcaagcctccccctttttccaccaaacataatgatggtcattatggccaaacagttcaatttttgtttcatcagacaagaggacatttctccaaaaagtacgatctttgtccccatgtgcagttgcaaaccatagtctggctttttattgcGGTTTCGGgggagtggcttcttccttgctgagcggcctttcaggttatgttttactcgttttactgtggctatagatacttttgtgtctgtttcctccagcatcttcacaaggtcctggctgatttcttcatgatgttaagcaaagaggcactgagtttgaaggtaggccttgaaatacctctgcaggtacacctccaattgactcaaatgatgtcaattagcctatcagaagcttctaaagccatgacataattttctggaattttccaagctgtttaaaggcacagtcaaattagtgtatgtaaacttctgacgcactggaattgtgatacagtgaattataagtgaaataatctgtctgtaaacaattgttggaaaaattactcgtgtcatgcacaaagtacatgttCTAACCAACTTGTTaagttcgttaacaagaaatttgtggagtggttgaaaaggttttaatgactccaacctaagtgtatgtaaacttccgacttcaacagtataaACAATGCAATTGTTAAAGTGATGTTAAAAAAAAGCCTATTGGCTAGTttggacatcatttacaaactggagttaaaaaaaacaaaaataagctAGATTTGACATTAAAAATCATCATCAATTGGCTGAAAAGTATGAAAGGTAGAGGCCTCATAGCCTGGGGAGTTCTCTCGTTCTTCAGTTAAGAACTCCAGGCGGAACTGTGATCGCTGGGACACATGTAGACGGTTATCAAAATTGAACTCATCCTCCGTCATATCAGTAGTTGTCATAGTAGGATTATAGATTTGTGAACCATCGTAGAGTCCTCCTGAAATTACAAGTGTGTCGTCTGCTGCTAGGGATCCACCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU691442 True 3503 lncRNA 0.38 3 40782789 40787940

Neighbor

gene id symbol gene type direction distance location
tshba tshb coding downstream 26570 40754249 ~ 40756219 (-)
slc25a55a LOC106582726 coding downstream 33526 40733892 ~ 40749263 (-)
LOC110527758 LOC105008416 coding downstream 170740 40603451 ~ 40612049 (-)
LOC110527756 LOC106582724 coding downstream 186401 40585908 ~ 40596388 (-)
LOC110527755 LOC106582604 coding downstream 219837 40560358 ~ 40562952 (-)
slc16a1a LOC106582732 coding upstream 16113 40804053 ~ 40816448 (-)
LOC110527764 LOC106582736 coding upstream 368725 41156665 ~ 41348915 (-)
mov10a LOC106582737 coding upstream 657010 41444950 ~ 41467330 (-)
capza1a LOC106582739 coding upstream 681626 41469566 ~ 41485470 (-)
wnt2ba LOC106582740 coding upstream 732288 41520228 ~ 41536290 (-)
G607213 LOC106582731 non-coding downstream 503 40773270 ~ 40782286 (-)
G606953 NA non-coding downstream 165541 40617045 ~ 40617248 (-)
G606929 NA non-coding downstream 208439 40574150 ~ 40574350 (-)
G607250 NA non-coding upstream 37111 40825051 ~ 40825260 (-)
G607251 NA non-coding upstream 37378 40825318 ~ 40825618 (-)
G607256 NA non-coding upstream 45600 40833540 ~ 40833746 (-)
G607260 NA non-coding upstream 52981 40840921 ~ 40841120 (-)
G607278 NA non-coding upstream 66741 40854681 ~ 40854936 (-)
G606973 NA other downstream 152909 40629249 ~ 40629880 (-)
LOC110527741 LOC106582711 other downstream 558622 40135298 ~ 40275270 (-)
G606135 NA other downstream 941458 39838891 ~ 39841331 (-)
LOC110527723 LOC106582696 other downstream 1713961 39063005 ~ 39123578 (-)
G604484 NA other downstream 2143389 38584293 ~ 38639400 (-)
G607932 NA other upstream 373208 41161148 ~ 41163397 (-)
G608888 LOC106582750 other upstream 1156631 41944571 ~ 41951244 (-)
G608900 NA other upstream 1180629 41968569 ~ 42025704 (-)
G610047 NA other upstream 2047807 42835747 ~ 42836069 (-)

Expression


Co-expression Network