Gene
RNA
| Item | Value |
|---|---|
| gene id | G607454 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 40980769 ~ 40981105 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU691683 | True | 337 | lncRNA | 0.36 | 1 | 40980769 | 40981105 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-105j21.9 | LOC106582731 | coding | upstream | 197552 | 40778742 ~ 40783217 (+) |
| LOC110527761 | LOC106582730 | coding | upstream | 202698 | 40768279 ~ 40778071 (+) |
| tspan2a | LOC106582727 | coding | upstream | 247185 | 40715927 ~ 40733584 (+) |
| ngfb | LOC106582728 | coding | upstream | 272920 | 40683006 ~ 40707849 (+) |
| LOC110527753 | NA | coding | upstream | 474316 | 40493653 ~ 40506453 (+) |
| ppm1j | LOC106582733 | coding | downstream | 380084 | 41361189 ~ 41411312 (+) |
| rhoca | rhoc | coding | downstream | 433298 | 41414403 ~ 41439948 (+) |
| st7l | LOC106582738 | coding | downstream | 504583 | 41485688 ~ 41503766 (+) |
| LOC118965381 | NA | coding | downstream | 536680 | 41517785 ~ 41519333 (+) |
| LOC118965355 | LOC106582742 | coding | downstream | 634479 | 41615584 ~ 41616729 (+) |
| G607386 | NA | non-coding | upstream | 47426 | 40933136 ~ 40933343 (+) |
| G607302 | NA | non-coding | upstream | 109265 | 40871113 ~ 40871504 (+) |
| G607301 | NA | non-coding | upstream | 110768 | 40869688 ~ 40870001 (+) |
| G607264 | NA | non-coding | upstream | 133664 | 40846854 ~ 40847105 (+) |
| G607263 | NA | non-coding | upstream | 134909 | 40845644 ~ 40845860 (+) |
| G607472 | LOC100136012 | non-coding | downstream | 10013 | 40991118 ~ 40991426 (+) |
| G607506 | NA | non-coding | downstream | 38223 | 41019328 ~ 41019687 (+) |
| G607509 | NA | non-coding | downstream | 39522 | 41020627 ~ 41020885 (+) |
| G607519 | NA | non-coding | downstream | 50196 | 41031301 ~ 41031693 (+) |
| G607534 | NA | non-coding | downstream | 59520 | 41040625 ~ 41040955 (+) |
| G606977 | NA | other | upstream | 346330 | 40634181 ~ 40634439 (+) |
| LOC110527751 | NA | other | upstream | 540137 | 40438879 ~ 40457742 (+) |
| G606469 | NA | other | upstream | 749544 | 40230885 ~ 40231225 (+) |
| G606464 | LOC106582711 | other | upstream | 756598 | 40223027 ~ 40224171 (+) |
| G606452 | LOC106582711 | other | upstream | 773872 | 40206569 ~ 40206897 (+) |
| G607904 | NA | other | downstream | 481719 | 41462824 ~ 41463169 (+) |
| G608390 | LOC106582745 | other | downstream | 846106 | 41827211 ~ 41830808 (+) |
| G609436 | NA | other | downstream | 1839851 | 42820956 ~ 42821245 (+) |
| G610436 | NA | other | downstream | 2429286 | 43410391 ~ 43410806 (+) |
| G610563 | LOC106582806 | other | downstream | 2602915 | 43584020 ~ 43584896 (+) |
