Gene
RNA
| Item | Value |
|---|---|
| gene id | G607482 |
| gene name | LOC106962828 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 40998052 ~ 40998373 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| piggyBac transposable element-derived protein 4-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU691711 | True | 322 | lncRNA | 0.44 | 1 | 40998052 | 40998373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc16a1a | LOC106582732 | coding | downstream | 181604 | 40804053 ~ 40816448 (-) |
| tshba | tshb | coding | downstream | 241833 | 40754249 ~ 40756219 (-) |
| slc25a55a | LOC106582726 | coding | downstream | 248789 | 40733892 ~ 40749263 (-) |
| LOC110527758 | LOC105008416 | coding | downstream | 386003 | 40603451 ~ 40612049 (-) |
| LOC110527756 | LOC106582724 | coding | downstream | 401664 | 40585908 ~ 40596388 (-) |
| LOC110527764 | LOC106582736 | coding | upstream | 158292 | 41156665 ~ 41348915 (-) |
| mov10a | LOC106582737 | coding | upstream | 446577 | 41444950 ~ 41467330 (-) |
| capza1a | LOC106582739 | coding | upstream | 471193 | 41469566 ~ 41485470 (-) |
| wnt2ba | LOC106582740 | coding | upstream | 521855 | 41520228 ~ 41536290 (-) |
| cttnbp2nla | LOC106582741 | coding | upstream | 544534 | 41542907 ~ 41567433 (-) |
| G607478 | NA | non-coding | downstream | 3355 | 40994327 ~ 40994697 (-) |
| G607475 | NA | non-coding | downstream | 5158 | 40992563 ~ 40992894 (-) |
| G607460 | NA | non-coding | downstream | 13270 | 40984518 ~ 40984782 (-) |
| G607397 | NA | non-coding | downstream | 52983 | 40944857 ~ 40945069 (-) |
| G607278 | NA | non-coding | downstream | 143116 | 40854681 ~ 40854936 (-) |
| G607488 | NA | non-coding | upstream | 1261 | 40999634 ~ 41006422 (-) |
| G607494 | NA | non-coding | upstream | 12807 | 41011180 ~ 41011485 (-) |
| G607502 | NA | non-coding | upstream | 18680 | 41017053 ~ 41017255 (-) |
| G607554 | NA | non-coding | upstream | 54247 | 41052620 ~ 41052862 (-) |
| G607568 | NA | non-coding | upstream | 64535 | 41062908 ~ 41063157 (-) |
| G606973 | NA | other | downstream | 368172 | 40629249 ~ 40629880 (-) |
| LOC110527741 | LOC106582711 | other | downstream | 773885 | 40135298 ~ 40275270 (-) |
| G606135 | NA | other | downstream | 1156721 | 39838891 ~ 39841331 (-) |
| LOC110527723 | LOC106582696 | other | downstream | 1929224 | 39063005 ~ 39123578 (-) |
| G604484 | NA | other | downstream | 2358652 | 38584293 ~ 38639400 (-) |
| G607932 | NA | other | upstream | 162775 | 41161148 ~ 41163397 (-) |
| G608888 | LOC106582750 | other | upstream | 946198 | 41944571 ~ 41951244 (-) |
| G608900 | NA | other | upstream | 970196 | 41968569 ~ 42025704 (-) |
| G610047 | NA | other | upstream | 1837374 | 42835747 ~ 42836069 (-) |
