G607540


Basic Information

Item Value
gene id G607540
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 41045626 ~ 41045826 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU691770
GATGGATAGCGCCGATCTGATTCTTGTCGAGGTAGGAAGTTAAGGAATGCTTTGGTTGCGATAATCTCACACAATTAGGCGACAGTGTTGCTTCAGTGTTGCAGTGGTACTGGacagctagttgagaacaatgTCAAGCTGCTAGTTACATGGTGTCGTGGGTTGTCATCATGGGCGGCAGGTACTGTAGCGTAGcaatgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU691770 True 201 lncRNA 0.48 1 41045626 41045826

Neighbor

gene id symbol gene type direction distance location
si:ch211-105j21.9 LOC106582731 coding upstream 262409 40778742 ~ 40783217 (+)
LOC110527761 LOC106582730 coding upstream 267555 40768279 ~ 40778071 (+)
tspan2a LOC106582727 coding upstream 312042 40715927 ~ 40733584 (+)
ngfb LOC106582728 coding upstream 337777 40683006 ~ 40707849 (+)
LOC110527753 NA coding upstream 539173 40493653 ~ 40506453 (+)
ppm1j LOC106582733 coding downstream 315363 41361189 ~ 41411312 (+)
rhoca rhoc coding downstream 368577 41414403 ~ 41439948 (+)
st7l LOC106582738 coding downstream 439862 41485688 ~ 41503766 (+)
LOC118965381 NA coding downstream 471959 41517785 ~ 41519333 (+)
LOC118965355 LOC106582742 coding downstream 569758 41615584 ~ 41616729 (+)
G607534 NA non-coding upstream 4671 41040625 ~ 41040955 (+)
G607519 NA non-coding upstream 13933 41031301 ~ 41031693 (+)
G607509 NA non-coding upstream 24741 41020627 ~ 41020885 (+)
G607506 NA non-coding upstream 25939 41019328 ~ 41019687 (+)
G607472 LOC100136012 non-coding upstream 54200 40991118 ~ 40991426 (+)
G607577 NA non-coding downstream 25244 41071070 ~ 41071664 (+)
G607596 NA non-coding downstream 39436 41085262 ~ 41085837 (+)
G607605 NA non-coding downstream 46446 41092272 ~ 41092485 (+)
G607612 NA non-coding downstream 51549 41097375 ~ 41097638 (+)
G607679 NA non-coding downstream 98577 41144403 ~ 41144622 (+)
G606977 NA other upstream 411187 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 604994 40438879 ~ 40457742 (+)
G606469 NA other upstream 814401 40230885 ~ 40231225 (+)
G606464 LOC106582711 other upstream 821455 40223027 ~ 40224171 (+)
G606452 LOC106582711 other upstream 838729 40206569 ~ 40206897 (+)
G607904 NA other downstream 416998 41462824 ~ 41463169 (+)
G608390 LOC106582745 other downstream 781385 41827211 ~ 41830808 (+)
G609436 NA other downstream 1775130 42820956 ~ 42821245 (+)
G610436 NA other downstream 2364565 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 2538194 43584020 ~ 43584896 (+)

Expression


Co-expression Network