G607910


Basic Information

Item Value
gene id G607910
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 41469096 ~ 41484386 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU692167
ctgcagagaagaaccgGAGAAACTCCCCAGATACAAGTGTGCCAGCTTGtcgcttcatacccaagaagaatcgaggctgtaaccactgccaaaggtgcgtcaacagtgtactgagcaaagggtctgaatacttatttttatacatttgcaaaaatgactaaaaaccagcttttgctttgtcattatggtgtactgtgtgttgattgaggggggaaaataaaatgttatccattttagaataaggctgtaatgtaaaatgtggaaaaagtcaaggtctgaatactttccgaatgcactgtatagaatAGTTGAGACATAAGAACTGAAAGCAGAACAATATAGCAAAATAGTGTATTGTCCAATGCGTAAAAGCATTTTGGACACAAATGTACCAGTACACAGACAATGAATCTGTGTTATATTTCATATGTAAACAGTCAAGAGGTGCATTTCAAGTACTTCATTATAAAGTGATATACAATAATGTGTCTTTATTCAAATTGTCCCTTTACTGTATTTTCAGTGTTATTCAGAATTTACACATTTGGCACCAATTCTGATTAGAATTTTTCCCAATCAGAATATTTCTACACACTGGTATGGGAAACAGTTTGGTTAACAGTTAATGATCACAGTAGTTACAGCACTGCATTTGGTGCAACTTCTTCATTCCTTTTGTTATACATGTTTGAcattttgtataaaaaaaaatatgagtaAAAAGCTAAAAAGGAGGTAAAGGGAATATAGGTATTATATATTAACGTAGCCTAATTACTGATAGAGGATACTGATGGTACTGTAGGTACTGTACTTGTTTAGGCTTGATTAAACCAGAGCCGAGCACGTAGGCCTGCCTCGTGTGTGAAATGAAGATTCATTCGGTGTGATGAATTCCATTTTTTCCCCCAAACAGTTCAAAGTACATATCTTTACCACGGGAAAGATGGAACAGAACTGTTACTTGGGTCTTTTCTTTGGGGTGGGGAGGTGCACTATATTTTTGTCATATTAAATGGAGTATACACCGCACTCAGAAGAGACCTTGGGTTACAAAAATATTTGCCAATACCTATACAAAATTATATAGGTCGGAATTCAATCCAACGCAGATTAAAAGCCTATCGCTGTGTGCATGCTGTTAAAAGGCAATATCTCCGGACATTAACGGAGATCAAATAAGCCGTCAAGGAAGCGGATGGTAGCTCAGCTCAATCTGAAATCACATTTAACCAAAGATCAACCACAAAACACAGGTCATTTATCTGCATTTGTTTGAATCCCAGCGCTTGTAGGGTTACAAACAGGGCTTAAACAGATTGCTACCTGTGGCACCCAGACAACCAACTGAGGGGTATGACTACAATTTGAAGCGTGAGTGTGTGCGGGCAGGAGGGGGATGACCCAATGACCCAAACTTTCAGTGTCAGTAAAGgcattttctttttttatatttttgttgttgcaaatGAGCCAGAGATGAACAACCCATCAAAATGTCCTCTTAAAAGGCATCACCTTGTAACGTGGCGAAGGAAGTACACTAACTCCTGACATCAAATCGTGGCATTCTTCAACACAGACTAAATAGACACATTAGACCACAAATTTTATGAGACCACCCTCTCTTTTTCTGATTTCACCCGTTCAAGCGATTTGTCTTTGCagtaacacacagaaacagaccgACACACTGTCCTCTAGGCATTCTGCATCTCCTTGCCAATCTTGTAGCTGAGGATCTTGTTCCAGTCAATCTTGGTGCGGGTGACAGGAAGCTGTCGGCGTAAGGCTTTGAACGTGGTGTCAGACATGGTCTGGTAATTTTCACTGATGGCCGccattcttccatggcctgcataatcactagacatgtcacccattgaacatgttCGGTAGGCTCTgaatcgacgtgtacaacagcgtgttctacTTCCCGCAACCACTGAagatgagtgggacaacattccacaggccacaatcaacagcctgatcaactctatacgaaggagatgtgtcacactgcatgag

Function

NR:

description
F-actin-capping protein subunit alpha-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU692167 True 2031 lncRNA 0.40 2 41469096 41484386

Neighbor

gene id symbol gene type direction distance location
rhoca rhoc coding upstream 29148 41414403 ~ 41439948 (+)
ppm1j LOC106582733 coding upstream 57784 41361189 ~ 41411312 (+)
si:ch211-105j21.9 LOC106582731 coding upstream 685879 40778742 ~ 40783217 (+)
LOC110527761 LOC106582730 coding upstream 691025 40768279 ~ 40778071 (+)
tspan2a LOC106582727 coding upstream 735512 40715927 ~ 40733584 (+)
st7l LOC106582738 coding downstream 1302 41485688 ~ 41503766 (+)
LOC118965381 NA coding downstream 33399 41517785 ~ 41519333 (+)
LOC118965355 LOC106582742 coding downstream 131198 41615584 ~ 41616729 (+)
LOC110527773 LOC106582742 coding downstream 177148 41661534 ~ 41728773 (+)
LOC110527774 LOC106582743 coding downstream 258175 41742561 ~ 41754877 (+)
G607908 NA non-coding upstream 240 41468618 ~ 41468856 (+)
G607892 NA non-coding upstream 22525 41446296 ~ 41446571 (+)
G607891 NA non-coding upstream 22903 41445869 ~ 41446193 (+)
G607890 NA non-coding upstream 23710 41443542 ~ 41445386 (+)
G607805 NA non-coding upstream 154227 41312555 ~ 41314869 (+)
G608166 NA non-coding downstream 22433 41506819 ~ 41507211 (+)
G608169 NA non-coding downstream 24067 41508453 ~ 41508652 (+)
G608170 NA non-coding downstream 24511 41508897 ~ 41509173 (+)
G608174 NA non-coding downstream 26940 41511326 ~ 41511552 (+)
G608175 NA non-coding downstream 27416 41511802 ~ 41512042 (+)
G607904 NA other upstream 5927 41462824 ~ 41463169 (+)
G606977 NA other upstream 834657 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 1028464 40438879 ~ 40457742 (+)
G606469 NA other upstream 1237871 40230885 ~ 40231225 (+)
G606464 LOC106582711 other upstream 1244925 40223027 ~ 40224171 (+)
G608390 LOC106582745 other downstream 342825 41827211 ~ 41830808 (+)
G609436 NA other downstream 1336570 42820956 ~ 42821245 (+)
G610436 NA other downstream 1926005 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 2099634 43584020 ~ 43584896 (+)
G610622 NA other downstream 2344618 43829004 ~ 43831880 (+)

Expression


Co-expression Network