G608166


Basic Information

Item Value
gene id G608166
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 41506819 ~ 41507211 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU692441
aattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtcttcgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagtgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgctgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU692441 True 393 lncRNA 0.43 1 41506819 41507211

Neighbor

gene id symbol gene type direction distance location
st7l LOC106582738 coding upstream 3053 41485688 ~ 41503766 (+)
rhoca rhoc coding upstream 66871 41414403 ~ 41439948 (+)
ppm1j LOC106582733 coding upstream 95507 41361189 ~ 41411312 (+)
si:ch211-105j21.9 LOC106582731 coding upstream 723602 40778742 ~ 40783217 (+)
LOC110527761 LOC106582730 coding upstream 728748 40768279 ~ 40778071 (+)
LOC118965381 NA coding downstream 10574 41517785 ~ 41519333 (+)
LOC118965355 LOC106582742 coding downstream 108373 41615584 ~ 41616729 (+)
LOC110527773 LOC106582742 coding downstream 154323 41661534 ~ 41728773 (+)
LOC110527774 LOC106582743 coding downstream 235350 41742561 ~ 41754877 (+)
LOC110527781 LOC106582750 coding downstream 437326 41944537 ~ 41956332 (+)
G607910 NA non-coding upstream 22433 41469096 ~ 41484386 (+)
G607908 NA non-coding upstream 37963 41468618 ~ 41468856 (+)
G607892 NA non-coding upstream 60248 41446296 ~ 41446571 (+)
G607891 NA non-coding upstream 60626 41445869 ~ 41446193 (+)
G607890 NA non-coding upstream 61433 41443542 ~ 41445386 (+)
G608169 NA non-coding downstream 1242 41508453 ~ 41508652 (+)
G608170 NA non-coding downstream 1686 41508897 ~ 41509173 (+)
G608174 NA non-coding downstream 4115 41511326 ~ 41511552 (+)
G608175 NA non-coding downstream 4591 41511802 ~ 41512042 (+)
G607904 NA other upstream 43650 41462824 ~ 41463169 (+)
G606977 NA other upstream 872380 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 1066187 40438879 ~ 40457742 (+)
G606469 NA other upstream 1275594 40230885 ~ 40231225 (+)
G606464 LOC106582711 other upstream 1282648 40223027 ~ 40224171 (+)
G608390 LOC106582745 other downstream 320000 41827211 ~ 41830808 (+)
G609436 NA other downstream 1313745 42820956 ~ 42821245 (+)
G610436 NA other downstream 1903180 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 2076809 43584020 ~ 43584896 (+)
G610622 NA other downstream 2321793 43829004 ~ 43831880 (+)

Expression


Co-expression Network