G608681 (LOC106582742)


Basic Information

Item Value
gene id G608681
gene name LOC106582742
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 41615585 ~ 41616710 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU692996
GTGACAATGGTGTACCAGAAGGAGGCTGGAATGCTGGTGAACTTGGTCGACGACGACCCCTTCTCTGCGTAGAACATGACCGTGGCAAAGATGATGATGGCCATggtgagggagaagaggaggaagcccAGCTCGGAGGCGCAGCTCTTCAGCGTGTACCCCAGGATCCTGAGGCCCTGCGAGTGGCGGGAGAACTTGAAGATGCGGAACACACGGAACACTCTGAGCGTGACGAAGGCCCCGCTCACATCCTCATTGTCTGTCATCACCAGGCCGATGTAGTAGGGAAAGATGGCTACCACGTCTATGATGCTCATCACACTGCGCATAAATTGGTAGCGGCTGGGCGCGGCGAACAGTCTCATGAGGTACTCCACGGTGAAGATGAGGACGCAGGCTGTGTCCATGCAGAAGAAGGCGATGGTATAGCGCTCGCCACACGGCATATCCTTCTGTGAAGGCGTGGCACCACAAGGTACCGTCTCTATCACGTTGGTGAGGACTGAGATGGCGATGAAGAAGCCGGTGACATAGTAGAACACAAGGGCCATGGTGGAGGTGTGAGGGTTCTCAAAGGCCCTCCACATGGTCTCTCTGTATGTCATGTTGGGCAGCTTGCAGTCCTTGTTGTCATCCTGGTCATCCTGGAGACGCTCCGCGTTCTCCCGCTTCCGGTCCTTGTACTCTTCGTAGCAGCAGTCGCCGATGATCTCCGGAATGATGCCGAAGAAAGTTAGCTCTTCGTCATAGGCCGAGATGCACTCGTAGCGAGGATAGTGCAACTTTCCCGTCCGGTAGAAGTTGAGAATGCTGCGGAAGGAGTCTGGGTCCCGGTCGAAGAAATACTCCTTTGTCTCCTCATCGTAAAAAAACTGTTTCTCTGAGCTTCCCAGCAGGGTGTCTGGGTAGCGGTCCAGTGTGGTCCTCCAGGTCTGGAAGCGTCGTCCACTCACGTTCAGGATGATCAGCTCGTCATGTCTCTTTCTGTGGTCTCTAGGAGCAATGGGCATGGGGCAGTTGGCCACAGGCATCCAGCCAATAGCTGCTGCCCGTGCAAAGGGAAGCCATGCAGCCACTCCTGCCGCCATGGCGACTCACTCTGTGTTCCGGCTTGCCTTAAAATTAC

Function

NR:

description
potassium voltage-gated channel subfamily D member 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU692996 True 1126 lncRNA 0.56 1 41615585 41616710

Neighbor

gene id symbol gene type direction distance location
cttnbp2nla LOC106582741 coding downstream 48152 41542907 ~ 41567433 (-)
wnt2ba LOC106582740 coding downstream 79295 41520228 ~ 41536290 (-)
capza1a LOC106582739 coding downstream 130115 41469566 ~ 41485470 (-)
mov10a LOC106582737 coding downstream 148255 41444950 ~ 41467330 (-)
LOC110527764 LOC106582736 coding downstream 266670 41156665 ~ 41348915 (-)
rap1b LOC106582744 coding upstream 181360 41798070 ~ 41817887 (-)
LOC110527776 LOC106582745 coding upstream 205031 41821741 ~ 41834379 (-)
LOC110527777 LOC106582746 coding upstream 218968 41835678 ~ 41843620 (-)
LOC110527778 LOC106582747 coding upstream 227626 41844336 ~ 41861084 (-)
LOC110527779 LOC106582748 coding upstream 238513 41855223 ~ 41873805 (-)
G608242 NA non-coding downstream 105878 41509468 ~ 41509707 (-)
G608167 NA non-coding downstream 108536 41506849 ~ 41507049 (-)
G608128 NA non-coding downstream 171459 41443538 ~ 41444126 (-)
G608127 NA non-coding downstream 172931 41442419 ~ 41442654 (-)
G608069 rhoc non-coding downstream 175640 41414414 ~ 41439945 (-)
G608745 NA non-coding upstream 81961 41698671 ~ 41698883 (-)
G608748 NA non-coding upstream 83587 41700297 ~ 41700508 (-)
G608782 NA non-coding upstream 202433 41819143 ~ 41821578 (-)
G608841 NA non-coding upstream 245559 41862269 ~ 41862560 (-)
G607932 NA other downstream 452188 41161148 ~ 41163397 (-)
G606973 NA other downstream 985705 40629249 ~ 40629880 (-)
LOC110527741 LOC106582711 other downstream 1391418 40135298 ~ 40275270 (-)
G606135 NA other downstream 1774254 39838891 ~ 39841331 (-)
G608888 LOC106582750 other upstream 327861 41944571 ~ 41951244 (-)
G608900 NA other upstream 351859 41968569 ~ 42025704 (-)
G610047 NA other upstream 1219037 42835747 ~ 42836069 (-)
G610182 NA other upstream 1490417 43107127 ~ 43162969 (-)
G610190 NA other upstream 1496438 43113148 ~ 43116144 (-)

Expression


Co-expression Network