G608316


Basic Information

Item Value
gene id G608316
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 41627303 ~ 41627621 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU692595
tggtggctgttgtcgttgtgttgctggttcgagcccagggaggagcgaggagagagacggaagctatactgttacactggcaatactaaagtgcctataagaacatccaatagtcaaaggttaatgaaatacaaatggtatagagggaaatagtcctataattactataataactacaacctaaaacttcttacctgggaatattgaagactcatgttaaaaggaaccaccagctttcatatgttctcatgttctgagcaaggaactgaaacgttagctttcttacatagcacatattgcacttttactttcttctcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU692595 True 319 lncRNA 0.39 1 41627303 41627621

Neighbor

gene id symbol gene type direction distance location
LOC118965355 LOC106582742 coding upstream 10574 41615584 ~ 41616729 (+)
LOC118965381 NA coding upstream 107998 41517785 ~ 41519333 (+)
st7l LOC106582738 coding upstream 123537 41485688 ~ 41503766 (+)
rhoca rhoc coding upstream 187355 41414403 ~ 41439948 (+)
ppm1j LOC106582733 coding upstream 215991 41361189 ~ 41411312 (+)
LOC110527773 LOC106582742 coding downstream 33913 41661534 ~ 41728773 (+)
LOC110527774 LOC106582743 coding downstream 114940 41742561 ~ 41754877 (+)
LOC110527781 LOC106582750 coding downstream 316916 41944537 ~ 41956332 (+)
LOC110527782 LOC106582752 coding downstream 373302 42000923 ~ 42059047 (+)
LOC110527783 LOC106582753 coding downstream 432707 42060328 ~ 42225672 (+)
G608315 NA non-coding upstream 354 41626717 ~ 41626949 (+)
G608175 NA non-coding upstream 115261 41511802 ~ 41512042 (+)
G608174 NA non-coding upstream 115751 41511326 ~ 41511552 (+)
G608170 NA non-coding upstream 118130 41508897 ~ 41509173 (+)
G608371 NA non-coding downstream 68581 41696202 ~ 41696405 (+)
G608383 NA non-coding downstream 88227 41715848 ~ 41716087 (+)
G608389 NA non-coding downstream 180532 41808153 ~ 41817714 (+)
G608456 NA non-coding downstream 216753 41844374 ~ 41846862 (+)
G608446 NA non-coding downstream 247588 41875209 ~ 41877230 (+)
G607904 NA other upstream 164134 41462824 ~ 41463169 (+)
G606977 NA other upstream 992864 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 1186671 40438879 ~ 40457742 (+)
G606469 NA other upstream 1396078 40230885 ~ 40231225 (+)
G606464 LOC106582711 other upstream 1403132 40223027 ~ 40224171 (+)
G608390 LOC106582745 other downstream 199590 41827211 ~ 41830808 (+)
G609436 NA other downstream 1193335 42820956 ~ 42821245 (+)
G610436 NA other downstream 1782770 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 1956399 43584020 ~ 43584896 (+)
G610622 NA other downstream 2201383 43829004 ~ 43831880 (+)

Expression


Co-expression Network