G608371


Basic Information

Item Value
gene id G608371
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 41696202 ~ 41696405 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU692653
CAAAATGCCCTTTCCCTTAATCCTGGTTCATGTGTCAACAATCAACTGCAAGGTATGAGCAGTCAGCAGATCACACAACAAGTAGGTTACTCAGAAGACAGTCAGCACTTAAAGTATATGGCCCTAGCTAAcaaaaagacagtactagatAACAACAGATTAAGACAAAAATTATACTTATCACTTCTGGAGaaatcaggagtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU692653 True 204 lncRNA 0.39 1 41696202 41696405

Neighbor

gene id symbol gene type direction distance location
LOC118965355 LOC106582742 coding upstream 79473 41615584 ~ 41616729 (+)
LOC118965381 NA coding upstream 176897 41517785 ~ 41519333 (+)
st7l LOC106582738 coding upstream 192436 41485688 ~ 41503766 (+)
rhoca rhoc coding upstream 256254 41414403 ~ 41439948 (+)
ppm1j LOC106582733 coding upstream 284890 41361189 ~ 41411312 (+)
LOC110527774 LOC106582743 coding downstream 46156 41742561 ~ 41754877 (+)
LOC110527781 LOC106582750 coding downstream 248132 41944537 ~ 41956332 (+)
LOC110527782 LOC106582752 coding downstream 304518 42000923 ~ 42059047 (+)
LOC110527783 LOC106582753 coding downstream 363923 42060328 ~ 42225672 (+)
LOC110527785 LOC106582755 coding downstream 530403 42226808 ~ 42232599 (+)
G608316 NA non-coding upstream 68581 41627303 ~ 41627621 (+)
G608315 NA non-coding upstream 69253 41626717 ~ 41626949 (+)
G608175 NA non-coding upstream 184160 41511802 ~ 41512042 (+)
G608174 NA non-coding upstream 184650 41511326 ~ 41511552 (+)
G608383 NA non-coding downstream 19443 41715848 ~ 41716087 (+)
G608389 NA non-coding downstream 111748 41808153 ~ 41817714 (+)
G608456 NA non-coding downstream 147969 41844374 ~ 41846862 (+)
G608446 NA non-coding downstream 178804 41875209 ~ 41877230 (+)
G609098 NA non-coding downstream 568031 42264436 ~ 42264667 (+)
G607904 NA other upstream 233033 41462824 ~ 41463169 (+)
G606977 NA other upstream 1061763 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 1255570 40438879 ~ 40457742 (+)
G606469 NA other upstream 1464977 40230885 ~ 40231225 (+)
G606464 LOC106582711 other upstream 1472031 40223027 ~ 40224171 (+)
G608390 LOC106582745 other downstream 130806 41827211 ~ 41830808 (+)
G609436 NA other downstream 1124551 42820956 ~ 42821245 (+)
G610436 NA other downstream 1713986 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 1887615 43584020 ~ 43584896 (+)
G610622 NA other downstream 2132599 43829004 ~ 43831880 (+)

Expression


Co-expression Network