G609113


Basic Information

Item Value
gene id G609113
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 42275826 ~ 42276063 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU693472
gataattactttaCACATTGGAATGTATTTACAAAGaagcagagcaaactagaatgctatatggccctaaacagagagtacacagtggcagaatacctgaccactgtgactgcccCAAAATTacggaaagctttgactatgtacagactcagtgagcatggcctggctctcaggagaagacaggctgtgtgaaCACTGCCCACAAAACGAGATgggaactgagctgcacttcctaacc

Function

NR:

description
PREDICTED: uncharacterized protein LOC104955046

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU693472 True 238 lncRNA 0.45 1 42275826 42276063

Neighbor

gene id symbol gene type direction distance location
LOC110527785 LOC106582755 coding upstream 43227 42226808 ~ 42232599 (+)
LOC110527783 LOC106582753 coding upstream 50154 42060328 ~ 42225672 (+)
LOC110527782 LOC106582752 coding upstream 216779 42000923 ~ 42059047 (+)
LOC110527781 LOC106582750 coding upstream 319494 41944537 ~ 41956332 (+)
LOC110527774 LOC106582743 coding upstream 520949 41742561 ~ 41754877 (+)
mst1ra LOC106582756 coding downstream 87567 42363630 ~ 42384059 (+)
camkva LOC106582757 coding downstream 185904 42461967 ~ 42500915 (+)
LOC110527788 LOC106582758 coding downstream 237033 42513096 ~ 42530382 (+)
LOC110527789 LOC106565988 coding downstream 409082 42685145 ~ 42759404 (+)
gnat1 LOC106582761 coding downstream 484323 42760386 ~ 42767396 (+)
G609108 NA non-coding upstream 1790 42273817 ~ 42274036 (+)
G609099 NA non-coding upstream 10208 42265281 ~ 42265618 (+)
G609098 NA non-coding upstream 11159 42264436 ~ 42264667 (+)
G608446 NA non-coding upstream 398596 41875209 ~ 41877230 (+)
G608456 NA non-coding upstream 428964 41844374 ~ 41846862 (+)
G609223 NA non-coding downstream 154457 42430520 ~ 42430738 (+)
G609273 NA non-coding downstream 225496 42501559 ~ 42501773 (+)
G609277 NA non-coding downstream 233981 42510044 ~ 42510325 (+)
G609279 NA non-coding downstream 235480 42511543 ~ 42511793 (+)
G609226 NA non-coding downstream 254809 42530872 ~ 42531524 (+)
G608390 LOC106582745 other upstream 445018 41827211 ~ 41830808 (+)
G607904 NA other upstream 812657 41462824 ~ 41463169 (+)
G606977 NA other upstream 1641387 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 1835194 40438879 ~ 40457742 (+)
G606469 NA other upstream 2044601 40230885 ~ 40231225 (+)
G609436 NA other downstream 544893 42820956 ~ 42821245 (+)
G610436 NA other downstream 1134328 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 1307957 43584020 ~ 43584896 (+)
G610622 NA other downstream 1552941 43829004 ~ 43831880 (+)
si:dkey-264d12.5 LOC106582817 other downstream 1726561 44002556 ~ 44035143 (+)

Expression


Co-expression Network