G609789


Basic Information

Item Value
gene id G609789
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 42408762 ~ 42409208 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU694246
TTAAGGATCACTGTGATAGGGTTGCATTTCACATCAAGTAGCCGTCAGGGAgctacagatgtagaatcttaatttgatcttCCTGTTGCATGAGAGCCTTCCTGAATTTGTTTTATCAGCCCTTACAAAAATgtacattcattataatccacataagaattcacatttcctgttgctgcaggattattttcctgctgtagcaacaCACTGgtcacagacatcagttcaacatctagttttcaTTTATATTGGTTGAGTTTTCAACTAACGTTAATTCAAGgtgaaatcaaccaaaaatgTCACCAATGTCATTGGATTTATGTTAGAATTTGGTTGAAAAAAGACTAAATGCTCTTACATTGATTCCTTCCAAATTCAATTTGTTTTCCACATTTATTCACTGTCATCacatacattttttggggttgaaatgatgtggaagtTGTT

Function

NR:

description
nucleotide-binding oligomerization domain-containing protein 2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU694246 True 447 lncRNA 0.35 1 42408762 42409208

Neighbor

gene id symbol gene type direction distance location
LOC110527780 LOC107554191 coding downstream 483154 41880174 ~ 41925608 (-)
LOC110527779 LOC106582748 coding downstream 534957 41855223 ~ 41873805 (-)
LOC110527778 LOC106582747 coding downstream 554100 41844336 ~ 41861084 (-)
LOC110527777 LOC106582746 coding downstream 565142 41835678 ~ 41843620 (-)
LOC110527776 LOC106582745 coding downstream 574383 41821741 ~ 41834379 (-)
edem1 LOC106582760 coding upstream 358879 42768087 ~ 42773999 (-)
LOC110527792 LOC106565990 coding upstream 366269 42775477 ~ 42793038 (-)
LOC110527110 LOC106582620 coding upstream 396134 42805342 ~ 42815037 (-)
si:ch73-361p23.3 LOC106582621 coding upstream 433505 42842713 ~ 42845808 (-)
cplane2 rsg1 coding upstream 475748 42884956 ~ 42887226 (-)
G609757 LOC106582756 non-coding downstream 26386 42379207 ~ 42382376 (-)
G609141 NA non-coding downstream 107407 42301097 ~ 42301355 (-)
G609129 NA non-coding downstream 119279 42289161 ~ 42289483 (-)
G609094 NA non-coding downstream 151295 42257214 ~ 42257467 (-)
G608956 NA non-coding downstream 349447 42059225 ~ 42059315 (-)
G609802 NA non-coding upstream 15926 42425134 ~ 42425395 (-)
G609811 NA non-coding upstream 28787 42437995 ~ 42438230 (-)
G609859 LOC106582757 non-coding upstream 82286 42491494 ~ 42497318 (-)
G609871 NA non-coding upstream 99949 42509157 ~ 42509458 (-)
G609873 NA non-coding upstream 103243 42512451 ~ 42512828 (-)
G608900 NA other downstream 383058 41968569 ~ 42025704 (-)
G608888 LOC106582750 other downstream 457518 41944571 ~ 41951244 (-)
LOC110527764 LOC106582736 other downstream 1059863 41156665 ~ 41348915 (-)
G607932 NA other downstream 1245365 41161148 ~ 41163397 (-)
G606973 NA other downstream 1778882 40629249 ~ 40629880 (-)
G610047 NA other upstream 426539 42835747 ~ 42836069 (-)
G610182 NA other upstream 697919 43107127 ~ 43162969 (-)
G610190 NA other upstream 703940 43113148 ~ 43116144 (-)
G610183 NA other upstream 718603 43127811 ~ 43167320 (-)
G610185 NA other upstream 742362 43151570 ~ 43157089 (-)

Expression


Co-expression Network