Gene
RNA
| Item | Value |
|---|---|
| gene id | G609223 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 42430520 ~ 42430738 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU693588 | True | 219 | lncRNA | 0.42 | 1 | 42430520 | 42430738 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mst1ra | LOC106582756 | coding | upstream | 46461 | 42363630 ~ 42384059 (+) |
| LOC110527785 | LOC106582755 | coding | upstream | 197921 | 42226808 ~ 42232599 (+) |
| LOC110527783 | LOC106582753 | coding | upstream | 204848 | 42060328 ~ 42225672 (+) |
| LOC110527782 | LOC106582752 | coding | upstream | 371473 | 42000923 ~ 42059047 (+) |
| LOC110527781 | LOC106582750 | coding | upstream | 474188 | 41944537 ~ 41956332 (+) |
| camkva | LOC106582757 | coding | downstream | 31229 | 42461967 ~ 42500915 (+) |
| LOC110527788 | LOC106582758 | coding | downstream | 82358 | 42513096 ~ 42530382 (+) |
| LOC110527789 | LOC106565988 | coding | downstream | 254407 | 42685145 ~ 42759404 (+) |
| gnat1 | LOC106582761 | coding | downstream | 329648 | 42760386 ~ 42767396 (+) |
| LOC110527794 | LOC106582762 | coding | downstream | 424182 | 42854920 ~ 42883680 (+) |
| G609113 | NA | non-coding | upstream | 154457 | 42275826 ~ 42276063 (+) |
| G609108 | NA | non-coding | upstream | 156484 | 42273817 ~ 42274036 (+) |
| G609099 | NA | non-coding | upstream | 164902 | 42265281 ~ 42265618 (+) |
| G609098 | NA | non-coding | upstream | 165853 | 42264436 ~ 42264667 (+) |
| G608446 | NA | non-coding | upstream | 553290 | 41875209 ~ 41877230 (+) |
| G609273 | NA | non-coding | downstream | 70821 | 42501559 ~ 42501773 (+) |
| G609277 | NA | non-coding | downstream | 79306 | 42510044 ~ 42510325 (+) |
| G609279 | NA | non-coding | downstream | 80805 | 42511543 ~ 42511793 (+) |
| G609226 | NA | non-coding | downstream | 100134 | 42530872 ~ 42531524 (+) |
| G609421 | NA | non-coding | downstream | 364799 | 42795537 ~ 42795783 (+) |
| G608390 | LOC106582745 | other | upstream | 599712 | 41827211 ~ 41830808 (+) |
| G607904 | NA | other | upstream | 967351 | 41462824 ~ 41463169 (+) |
| G606977 | NA | other | upstream | 1796081 | 40634181 ~ 40634439 (+) |
| LOC110527751 | NA | other | upstream | 1989888 | 40438879 ~ 40457742 (+) |
| G606469 | NA | other | upstream | 2199295 | 40230885 ~ 40231225 (+) |
| G609436 | NA | other | downstream | 390218 | 42820956 ~ 42821245 (+) |
| G610436 | NA | other | downstream | 979653 | 43410391 ~ 43410806 (+) |
| G610563 | LOC106582806 | other | downstream | 1153282 | 43584020 ~ 43584896 (+) |
| G610622 | NA | other | downstream | 1398266 | 43829004 ~ 43831880 (+) |
| si:dkey-264d12.5 | LOC106582817 | other | downstream | 1571886 | 44002556 ~ 44035143 (+) |
