G610046 (LOC100380853)



Basic Information


Item Value
gene id G610046
gene name LOC100380853
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 42833577 ~ 42834270 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU694522
tctggtcatcctgggataggtcggacgatgcgctgtcttgatgggaggtactggtggcccactttagctaaggacgtgaggatttatgtttcctcctgctcggtgtgcgcccagtgcaaggctcctagacacctgcccagaggtaagctacaacctctcccgttcctcaacggccgtggtcgcacctgtcggtggattttttgactgatcttccaccttcacagggttacaccacgatcctggtcgttgtggatcggttttcgaagtcctgtcgtctcctccctttgcccggtctccctacggccttacaaactgcagaggccctgtttacacacgttttccggcactatggggtgcctgaggatatagtgtctgatcggggtccccagttcacatcaagggtctggaaggcgttcatggagcgtctggggatttcggttagtcttacctcaggtttccccccccgagagtaatgggcaggtggagagagttaaccagtatttctacttgaacatcaaagtgagtaaactgagatatgacatAAGGACATAAGGATATGAGGATATGAcataaggagttaatcagggcaatttttccataaatagacaggtatttttacctctccatggttgcaggatcttgtctatttttacaagttttctattgaaattcagtgtggagagcttatttatat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU694522 True 694 lncRNA 0.49 1 42833577 42834270

Neighbor


gene id symbol gene type direction distance location
LOC110527110 LOC106582620 coding downstream 18540 42805342 ~ 42815037 (-)
LOC110527792 LOC106565990 coding downstream 40539 42775477 ~ 42793038 (-)
edem1 LOC106582760 coding downstream 59578 42768087 ~ 42773999 (-)
LOC110527780 LOC107554191 coding downstream 907969 41880174 ~ 41925608 (-)
LOC110527779 LOC106582748 coding downstream 959772 41855223 ~ 41873805 (-)
si:ch73-361p23.3 LOC106582621 coding upstream 8443 42842713 ~ 42845808 (-)
cplane2 rsg1 coding upstream 50686 42884956 ~ 42887226 (-)
LOC110527797 hspb7 coding upstream 54348 42888618 ~ 42889492 (-)
LOC110527798 epha2 coding upstream 57040 42891310 ~ 42911129 (-)
LOC110527801 LOC106582766 coding upstream 94979 42929249 ~ 42933032 (-)
G610040 NA non-coding downstream 4648 42828689 ~ 42828929 (-)
G610025 NA non-coding downstream 29809 42803477 ~ 42803768 (-)
G610024 NA non-coding downstream 34048 42799328 ~ 42799529 (-)
G609980 NA non-coding downstream 66186 42760566 ~ 42767391 (-)
G609825 NA non-coding downstream 303203 42528854 ~ 42530374 (-)
G610049 NA non-coding upstream 6788 42841058 ~ 42841287 (-)
G610058 NA non-coding upstream 18172 42852442 ~ 42852781 (-)
G610084 NA non-coding upstream 55857 42890127 ~ 42890427 (-)
G610090 NA non-coding upstream 75019 42909289 ~ 42909517 (-)
G610093 NA non-coding upstream 78824 42913094 ~ 42913334 (-)
G608900 NA other downstream 807873 41968569 ~ 42025704 (-)
G608888 LOC106582750 other downstream 882333 41944571 ~ 41951244 (-)
LOC110527764 LOC106582736 other downstream 1484678 41156665 ~ 41348915 (-)
G607932 NA other downstream 1670180 41161148 ~ 41163397 (-)
G606973 NA other downstream 2203697 40629249 ~ 40629880 (-)
G610047 NA other upstream 1477 42835747 ~ 42836069 (-)
G610182 NA other upstream 272857 43107127 ~ 43162969 (-)
G610190 NA other upstream 278878 43113148 ~ 43116144 (-)
G610183 NA other upstream 293541 43127811 ~ 43167320 (-)
G610185 NA other upstream 317300 43151570 ~ 43157089 (-)

Expression



Co-expression Network