G609449


Basic Information

Item Value
gene id G609449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 42836851 ~ 42837260 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU693848
GTgctggcccattccagggctttcccggtgaggcatgagaTGAGGGCGCAACTCACTgtcagatggtactggggagACCGTGGCCAGATACAAGTTCAGcttaaggaggaaaccctggcagccggcagtatctccgttgtatcccgtGGGTAGGGATAAATGGATCTTCGGTTCCGGAGGGGAAAAAGCGTTCAAGGGAgattccggttgtggtggtggtggcgctggagaaactccctgtctctcccagcaatCCATATTCTGGACAATGCCATCCATTACAGTGCTCAAACAGTCAATCGCCTCCGCTTGTTCCCGGACACGTTCCTCCACCTCCATGAGcgtagtgtcctctcctgctgacttcatatttttagggtcagagattctgtcagcgccgtgtgtatagg

Function

NR:

description
uncharacterized protein LOC110532926

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU693848 True 410 lncRNA 0.54 1 42836851 42837260

Neighbor

gene id symbol gene type direction distance location
gnat1 LOC106582761 coding upstream 69455 42760386 ~ 42767396 (+)
LOC110527789 LOC106565988 coding upstream 77447 42685145 ~ 42759404 (+)
LOC110527788 LOC106582758 coding upstream 306469 42513096 ~ 42530382 (+)
camkva LOC106582757 coding upstream 335936 42461967 ~ 42500915 (+)
mst1ra LOC106582756 coding upstream 452792 42363630 ~ 42384059 (+)
LOC110527794 LOC106582762 coding downstream 17660 42854920 ~ 42883680 (+)
LOC110527799 LOC106582765 coding downstream 86287 42923547 ~ 42930634 (+)
rbp7b LOC106582767 coding downstream 95723 42932983 ~ 42935248 (+)
LOC110527804 cssa22h3orf18 coding downstream 148400 42985660 ~ 42991364 (+)
LOC110527808 ab14b coding downstream 190664 43027924 ~ 43035211 (+)
G609437 NA non-coding upstream 14847 42821760 ~ 42822004 (+)
G609432 NA non-coding upstream 20294 42816238 ~ 42816557 (+)
G609423 NA non-coding upstream 34104 42802515 ~ 42802747 (+)
G609421 NA non-coding upstream 41068 42795537 ~ 42795783 (+)
G609226 NA non-coding upstream 305327 42530872 ~ 42531524 (+)
G609457 NA non-coding downstream 10206 42847466 ~ 42847894 (+)
G609489 NA non-coding downstream 52766 42890026 ~ 42890568 (+)
G609504 NA non-coding downstream 78571 42915831 ~ 42916504 (+)
G609486 NA non-coding downstream 81958 42919218 ~ 42919522 (+)
G609482 NA non-coding downstream 82694 42919954 ~ 42922980 (+)
G609436 NA other upstream 15606 42820956 ~ 42821245 (+)
G608390 LOC106582745 other upstream 1006043 41827211 ~ 41830808 (+)
G607904 NA other upstream 1373682 41462824 ~ 41463169 (+)
G606977 NA other upstream 2202412 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 2396219 40438879 ~ 40457742 (+)
G610436 NA other downstream 573131 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 746760 43584020 ~ 43584896 (+)
G610622 NA other downstream 991744 43829004 ~ 43831880 (+)
si:dkey-264d12.5 LOC106582817 other downstream 1165364 44002556 ~ 44035143 (+)
G613664 NA other downstream 3441474 46278734 ~ 46279333 (+)

Expression


Co-expression Network