XLOC_025379 (si:ch211-156b7.5)


Basic Information

Item Value
gene id XLOC_025379
gene name si:ch211-156b7.5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 26322596 ~ 26326763 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050072
CTCTTTATGCTTGAATTTTTTGTGAACAGGCAGCAGAGTCAGCTCCCATCCGGCAGGAATGGATGGACCAGCTGTGGAAAGCCATGCTGATCAGCGGTCCTGACAGATCTGGATCAATCTCCAATGGGGAGCTGCTGCCAGAGTCCAGCAGATATTCAATGGACAGTAGATGCTTCTCCATTGGTCAAGAGTCATTTCAGTCCTTTTCTGatgcTGATGACACACAAGATGGTTTGCCCACAGACAATGAAATGGAACAAAACACTGAAGAGTTTTTGCTGACGGACTATGAATATGACGTTCTACCACCTAGAAAACTTAAAGAGGCCATTTATGACACTCCCACATCCAAGAGGTCAACTAATGAGAGAGAGCATGATGTGACTGATAGCATCTATGATATCCCAAACAGCTTGATTAGGAAATTCAATGAACAAACAgttgAATCTCACAGCGGCAGAGCGAGGCCTGAGAGCGGTGGTCTTCTGAATGACATGATAGCCTGTCTGGACAGTGAATCTGCTGCCTGGGTCAAAACGGCTCCTCTGTGAATGTCTGGTGAATGTCTATGAGAAAACctatttgtaaatgtgtgttgTTGCATTAAAAtcagatagttcactcaaaagtgagaAGATTCTACAATCATTTAATCTTTATGTTGTTCCAATATCTATAAAACCCCAACATGTTCTTATTATAGCCTGAAGAAGTAATGCCAGAATATTTAATAAACGTCTTATCTTGTGTCAATAATGGACAAGTGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103966

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050072 True 767 mRNA 0.42 6 26322596 26326763

Neighbor

gene id symbol gene type direction distance location
XLOC_025378 rhot1a coding upstream 2838 26288981 ~ 26319758 (+)
XLOC_025377 adap2 coding upstream 41035 26267725 ~ 26281561 (+)
XLOC_025376 atad5a coding upstream 56132 26244353 ~ 26266464 (+)
XLOC_025375 nudt9 coding upstream 89823 26223376 ~ 26232773 (+)
XLOC_025374 FP016144.1 coding upstream 128137 26194344 ~ 26194459 (+)
XLOC_025380 si:ch211-156b7.4 coding downstream 16005 26342768 ~ 26343648 (+)
XLOC_025381 rps15a coding downstream 18969 26345732 ~ 26351656 (+)
XLOC_025382 NA coding downstream 28531 26355294 ~ 26361798 (+)
XLOC_025383 NA coding downstream 84470 26411233 ~ 26416784 (+)
XLOC_025384 NA coding downstream 309057 26635820 ~ 26636398 (+)
XLOC_025429 BX649540.1 misc downstream 3921976 30248739 ~ 30249036 (+)
XLOC_025371 NA non-coding upstream 242196 26076494 ~ 26080400 (+)
XLOC_025364 NA non-coding upstream 335652 25985339 ~ 25986944 (+)
XLOC_025360 FP101990.1 non-coding upstream 477268 25844151 ~ 25845328 (+)
XLOC_025358 BX120006.1 non-coding upstream 569047 25752221 ~ 25753549 (+)
XLOC_025390 NA non-coding downstream 967545 27294308 ~ 27343689 (+)
XLOC_025391 NA non-coding downstream 1020076 27346839 ~ 27494805 (+)

Expression


Co-expression Network