G609489


Basic Information

Item Value
gene id G609489
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 42890026 ~ 42890568 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU693892
cagacctgtaacttcttctttaagaggttcctctgtcctccactcgttacctgtatggcacctgtttgaacttgttatcagtataaaagacacctgtccacaacctcaaacagtcacactccaaactccactatggccaagaccaaagagctgtcaaaggacaccagaaacaaaattgtagacctgcaccaggctgggaagactgaatctgcaataggtaagcagcttggtttgaagaaatcaactgtgggagcaattattaggaaatggaagacacacaagaccactgataatctccctcgatctggggctgttgctgggcaagatctcaccccgtggggtcaaaatgatcacaagaacggtgtgcaaaaaatcccagaaccacacggagggacctagtgaatgacctgcagagagctgggaccataggaacaaagcctaccatcagtaacacactacgccgccagggactcaaatcctgcagtgccagacgtgtccccctgcttaagccagtaaatgtccaggcccgtctgaagtttgcta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU693892 True 543 lncRNA 0.48 1 42890026 42890568

Neighbor

gene id symbol gene type direction distance location
LOC110527794 LOC106582762 coding upstream 6346 42854920 ~ 42883680 (+)
gnat1 LOC106582761 coding upstream 122630 42760386 ~ 42767396 (+)
LOC110527789 LOC106565988 coding upstream 130622 42685145 ~ 42759404 (+)
LOC110527788 LOC106582758 coding upstream 359644 42513096 ~ 42530382 (+)
camkva LOC106582757 coding upstream 389111 42461967 ~ 42500915 (+)
LOC110527799 LOC106582765 coding downstream 32979 42923547 ~ 42930634 (+)
rbp7b LOC106582767 coding downstream 42415 42932983 ~ 42935248 (+)
LOC110527804 cssa22h3orf18 coding downstream 95092 42985660 ~ 42991364 (+)
LOC110527808 ab14b coding downstream 137356 43027924 ~ 43035211 (+)
LOC110527818 NA coding downstream 634119 43524687 ~ 43526668 (+)
G609457 NA non-coding upstream 42132 42847466 ~ 42847894 (+)
G609449 NA non-coding upstream 52766 42836851 ~ 42837260 (+)
G609437 NA non-coding upstream 68022 42821760 ~ 42822004 (+)
G609432 NA non-coding upstream 73469 42816238 ~ 42816557 (+)
G609423 NA non-coding upstream 87279 42802515 ~ 42802747 (+)
G609504 NA non-coding downstream 25263 42915831 ~ 42916504 (+)
G609486 NA non-coding downstream 28650 42919218 ~ 42919522 (+)
G609482 NA non-coding downstream 29386 42919954 ~ 42922980 (+)
G609511 NA non-coding downstream 52163 42942731 ~ 42943096 (+)
G609440 LOC106582768 non-coding downstream 54661 42945229 ~ 42952239 (+)
G609436 NA other upstream 68781 42820956 ~ 42821245 (+)
G608390 LOC106582745 other upstream 1059218 41827211 ~ 41830808 (+)
G607904 NA other upstream 1426857 41462824 ~ 41463169 (+)
G606977 NA other upstream 2255587 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 2449394 40438879 ~ 40457742 (+)
G610436 NA other downstream 519823 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 693452 43584020 ~ 43584896 (+)
G610622 NA other downstream 938436 43829004 ~ 43831880 (+)
si:dkey-264d12.5 LOC106582817 other downstream 1112056 44002556 ~ 44035143 (+)
G613664 NA other downstream 3388166 46278734 ~ 46279333 (+)

Expression


Co-expression Network