Gene
RNA
| Item | Value |
|---|---|
| gene id | G610109 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 42942126 ~ 42942525 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU694597 | True | 400 | lncRNA | 0.40 | 1 | 42942126 | 42942525 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527801 | LOC106582766 | coding | downstream | 9094 | 42929249 ~ 42933032 (-) |
| LOC110527798 | epha2 | coding | downstream | 30997 | 42891310 ~ 42911129 (-) |
| LOC110527797 | hspb7 | coding | downstream | 52634 | 42888618 ~ 42889492 (-) |
| cplane2 | rsg1 | coding | downstream | 54900 | 42884956 ~ 42887226 (-) |
| si:ch73-361p23.3 | LOC106582621 | coding | downstream | 96318 | 42842713 ~ 42845808 (-) |
| LOC110527802 | LOC106582768 | coding | upstream | 2672 | 42945197 ~ 42952276 (-) |
| LOC110527803 | LOC106582769 | coding | upstream | 17894 | 42960419 ~ 42982836 (-) |
| LOC110527805 | NA | coding | upstream | 48922 | 42991447 ~ 43001777 (-) |
| LOC110527807 | LOC106582772 | coding | upstream | 60789 | 43003314 ~ 43027816 (-) |
| LOC110527806 | LOC106582605 | coding | upstream | 92117 | 43034642 ~ 43329567 (-) |
| G610103 | NA | non-coding | downstream | 5505 | 42936397 ~ 42936621 (-) |
| G610102 | NA | non-coding | downstream | 5868 | 42935956 ~ 42936258 (-) |
| G610101 | NA | non-coding | downstream | 6356 | 42935531 ~ 42935770 (-) |
| G610099 | NA | non-coding | downstream | 22591 | 42919213 ~ 42919535 (-) |
| G610096 | NA | non-coding | downstream | 25588 | 42916289 ~ 42916538 (-) |
| G610132 | NA | non-coding | upstream | 42200 | 42984725 ~ 42985483 (-) |
| G610180 | NA | non-coding | upstream | 163505 | 43106030 ~ 43122712 (-) |
| G610182 | NA | non-coding | upstream | 168328 | 43107127 ~ 43162969 (-) |
| G610254 | NA | non-coding | upstream | 300674 | 43243199 ~ 43243449 (-) |
| G610356 | NA | non-coding | upstream | 411277 | 43353802 ~ 43354039 (-) |
| G610047 | NA | other | downstream | 106057 | 42835747 ~ 42836069 (-) |
| G608900 | NA | other | downstream | 916422 | 41968569 ~ 42025704 (-) |
| G608888 | LOC106582750 | other | downstream | 990882 | 41944571 ~ 41951244 (-) |
| LOC110527764 | LOC106582736 | other | downstream | 1593227 | 41156665 ~ 41348915 (-) |
| G610190 | NA | other | upstream | 170623 | 43113148 ~ 43116144 (-) |
| G610183 | NA | other | upstream | 185286 | 43127811 ~ 43167320 (-) |
| G610185 | NA | other | upstream | 209045 | 43151570 ~ 43157089 (-) |
| LOC110527812 | LOC106582796 | other | upstream | 493053 | 43435578 ~ 43439076 (-) |
