G609506


Basic Information

Item Value
gene id G609506
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 42960420 ~ 42962095 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU693909
ACACCTCAAACagctttttattacatttttcaaTAACAGTACATTATCTATCTTGCATCCAGCTCGCTGTGGTACACCAACAtactgaaataaaatacaaaaaaaacggTGAAGAGTACAAGGATGCAGAGCTCTATCTTATCAATGGAAGGAGAAAAAGGAAATCTCAATTGAATTGCAAGTCATTTTACTTGTGGCCACACACAAATACATCACATTTATTGTACATCGCAGGGAAAATAAAGAAGAAATGTCACAACTATTAAAGAAAGTGCTTCTGTATAcagtgaagaagaaaaaaaaatgtcattcaAATGCTTTTTGACATATTtaagacaaaataaaaaaatattacaatAAGAAATCTGAAAATGTGTTTTGTTCCATTGGTTGTGAAAATTTAAAGGTGAGATTGTGTGAACCACCCAACAGAGCTCCCAATCATTCCTTTATGAATTATAAAAAGTGGCATCATTAGAACTGGTAAGCATATTTCAGAGTCTGCAGTCAATAGGAAATCATTCTTCACTTTTAATTCTCTGGTGCATAGCCTTGCCAGTGTAAGTACATAAATGTATGCAGAGTCTAGCCAAAAATACCTTGAATAAAGTTCAAATTATAGTTAACAGGTTACTATCCTTACGAAAAAGACAGACAACTTGGGCCTTTGCACCTTGGAAAGCAATTCTACAGCATGCACGCCTAAATTAACCCATGGCAGACCAGAAAAAAATATGACATTTCAGATCATTATTTTCAGACATTGATTTGTACATTTCATTCACAGAATAGCAAATGCAGTTCCAAGCACAGGAAGGGTCTGTCTATTTAGTCAGGTGAGGTCTATCACTGAGAagtggacaaaaaaaaaTAAATCCAGCCTTGCCACAAAAATAACAGAACCCCATTCTAAACCCCACCCAAATAACAAAAGACAGTTAACCCCTTCAGTTAACTGAAAATAAGTTACTCATACCCTTTTGCTTTGGAATGAGCATTCATCACAATTTATAGCATGTGCTTGGTTAGTTAACAATATTAGTTGAAGCAAATTTGATTTTCTGTGCAAAAAAAGCTGTGATTAAACAAACCGCTATTATATAAATACATCATAGAAACGTTCCGAAAGTTGCTCATGTAATCTGGTCAAGCTTTTGCTTTCAAGCTCTCTTCATGTTATTTTGTCCCATCTTTCTTACACGATTAAATTAGATTAAAATGAAAAGCTTTAATTTTAAAAACATATCTAAAACCACTGAGGAAACATGACAAACGAAAGTCATTGAATACAACTATAACCTTCAGAGAATagaattcttaaaaaaaaaaaatagaaaaaaaaagttaaatatttGTACAATTACGCTCCAACATTTGCTTTTGAGACGCATACATTTGCATGGGATGATAGTGTTTTTTCATTCAAGGTAACATAAAATGGTCCAAGAAGGAATGCACAAGTTTGATTTGATACCACAGGAAATCTTTTAAACTAGGTGATAAACAATTGTGCTCTTCTTTGTGTAGGAAAGGCATTGGTTTCCCTTCGTTTTTGTGGTTTCCAAGTCCGTTTAAAACGGGGTTGAAGAAGATGCTGTGAAATTTTACATTCTTAAGTTGTTGTAAATGGTCTTCCAGTGAACTTGAATTCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU693909 True 1655 lncRNA 0.33 2 42960420 42962095

Neighbor

gene id symbol gene type direction distance location
rbp7b LOC106582767 coding upstream 25172 42932983 ~ 42935248 (+)
LOC110527799 LOC106582765 coding upstream 29786 42923547 ~ 42930634 (+)
LOC110527794 LOC106582762 coding upstream 76740 42854920 ~ 42883680 (+)
gnat1 LOC106582761 coding upstream 193024 42760386 ~ 42767396 (+)
LOC110527789 LOC106565988 coding upstream 201016 42685145 ~ 42759404 (+)
LOC110527804 cssa22h3orf18 coding downstream 23565 42985660 ~ 42991364 (+)
LOC110527808 ab14b coding downstream 65829 43027924 ~ 43035211 (+)
LOC110527818 NA coding downstream 562592 43524687 ~ 43526668 (+)
LOC110528952 NA coding downstream 564836 43526931 ~ 43529047 (+)
mon1bb LOC106582805 coding downstream 574902 43536997 ~ 43545817 (+)
G609512 NA non-coding upstream 6469 42953672 ~ 42953951 (+)
G609440 LOC106582768 non-coding upstream 8181 42945229 ~ 42952239 (+)
G609511 NA non-coding upstream 17324 42942731 ~ 42943096 (+)
G609482 NA non-coding upstream 37440 42919954 ~ 42922980 (+)
G609486 NA non-coding upstream 40898 42919218 ~ 42919522 (+)
G609487 NA non-coding downstream 21611 42983706 ~ 42984145 (+)
G609484 NA non-coding downstream 29355 42991450 ~ 42995182 (+)
G609533 NA non-coding downstream 47449 43009544 ~ 43014662 (+)
G609532 NA non-coding downstream 55799 43017894 ~ 43020900 (+)
G609542 NA non-coding downstream 85782 43047877 ~ 43049711 (+)
G609436 NA other upstream 139175 42820956 ~ 42821245 (+)
G608390 LOC106582745 other upstream 1129612 41827211 ~ 41830808 (+)
G607904 NA other upstream 1497251 41462824 ~ 41463169 (+)
G606977 NA other upstream 2325981 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 2519788 40438879 ~ 40457742 (+)
G610436 NA other downstream 448296 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 621925 43584020 ~ 43584896 (+)
G610622 NA other downstream 866909 43829004 ~ 43831880 (+)
si:dkey-264d12.5 LOC106582817 other downstream 1040529 44002556 ~ 44035143 (+)
G613664 NA other downstream 3316639 46278734 ~ 46279333 (+)

Expression


Co-expression Network