G609487


Basic Information

Item Value
gene id G609487
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 42983706 ~ 42984145 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU693890
ggcacatgacagcctgcttggagtttgccaaaaggcacctaaaggactctcactactacagagagatccttgatgaaaacttgcttcAGAGACCGCAGGACCTCAGATTGTGGTgaaggctcaccttccaacaggacaacgaccctaagcacacagccaagacaacacaggagtggcttcgggacaagtctctgaatgtccttgagtggcccagccagagcccagacttgaacctgatctaacatctctggggagacctgaaaatagctgtgcagcgacgctccccatccaactttgAGAgcatatgcagagaagaatgggagaaactcccctaaatacaggtgtgccaagcttgtagtgtcataccgaATAAGACTCAgggctataatcactgccaaatgtgcttcaacaaagtactgagtatagtgtctgaatactta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU693890 True 440 lncRNA 0.49 1 42983706 42984145

Neighbor

gene id symbol gene type direction distance location
rbp7b LOC106582767 coding upstream 48458 42932983 ~ 42935248 (+)
LOC110527799 LOC106582765 coding upstream 53072 42923547 ~ 42930634 (+)
LOC110527794 LOC106582762 coding upstream 100026 42854920 ~ 42883680 (+)
gnat1 LOC106582761 coding upstream 216310 42760386 ~ 42767396 (+)
LOC110527789 LOC106565988 coding upstream 224302 42685145 ~ 42759404 (+)
LOC110527804 cssa22h3orf18 coding downstream 1515 42985660 ~ 42991364 (+)
LOC110527808 ab14b coding downstream 43779 43027924 ~ 43035211 (+)
LOC110527818 NA coding downstream 540542 43524687 ~ 43526668 (+)
LOC110528952 NA coding downstream 542786 43526931 ~ 43529047 (+)
mon1bb LOC106582805 coding downstream 552852 43536997 ~ 43545817 (+)
G609506 NA non-coding upstream 21611 42960420 ~ 42962095 (+)
G609512 NA non-coding upstream 29755 42953672 ~ 42953951 (+)
G609440 LOC106582768 non-coding upstream 31467 42945229 ~ 42952239 (+)
G609511 NA non-coding upstream 40610 42942731 ~ 42943096 (+)
G609482 NA non-coding upstream 60726 42919954 ~ 42922980 (+)
G609484 NA non-coding downstream 7305 42991450 ~ 42995182 (+)
G609533 NA non-coding downstream 25399 43009544 ~ 43014662 (+)
G609532 NA non-coding downstream 33749 43017894 ~ 43020900 (+)
G609542 NA non-coding downstream 63732 43047877 ~ 43049711 (+)
G609573 NA non-coding downstream 122770 43106915 ~ 43167294 (+)
G609436 NA other upstream 162461 42820956 ~ 42821245 (+)
G608390 LOC106582745 other upstream 1152898 41827211 ~ 41830808 (+)
G607904 NA other upstream 1520537 41462824 ~ 41463169 (+)
G606977 NA other upstream 2349267 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 2543074 40438879 ~ 40457742 (+)
G610436 NA other downstream 426246 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 599875 43584020 ~ 43584896 (+)
G610622 NA other downstream 844859 43829004 ~ 43831880 (+)
si:dkey-264d12.5 LOC106582817 other downstream 1018479 44002556 ~ 44035143 (+)
G613664 NA other downstream 3294589 46278734 ~ 46279333 (+)

Expression


Co-expression Network