G610132


Basic Information

Item Value
gene id G610132
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 42984725 ~ 42985483 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU694620
CTTTAACGTTGTTAGTGGAATCAATATGTATCCTTACTGGGTGGTTGGTATTTATTGGTGGTACGGAATGtattacattcctaaagacagAGATGAACTAAAGACAGAGATAAACTAATTGCCTAGACCTGAGTACTAGTATTTTACAAGTGAATCCCAGTGAAACACTGACATCTAGTGATGAATCTTCACAGAAAAAGTTAATCACTCATCTGTGTGAGAAGAACAGCACCATTTGATAAAATTTCATACAAGAATTTGACAGTGGAATACAAGCATTGTCGACTTTTTTTCGTCCGATATACAAGTTAATTGTACAATACAGCATATCATTACTATGGTAGATAACATTGTATTAGTCAAATAAATAGTTAGTAAGATTATATATTATGCACATAAAACATATCAATGGTCACGTTAAAATGAAGGCCATATTGTGAACAATATGCTCACCATCTTTGTCCACATCTTTGGCCATCTGAAGGAGCTCTCTCTTGGTGGGATTGATTCCCATTCAACTCATCAGTCGCTCCAGCTCCTGTGTCTTCACTGTTCCATTTCCTTCCTCATCAAACATCTCGAAAACACTTTTATACTCAGTGATCTGTTCTTGTattagagaagaaaaaaaagactgAATAAGAATAACTTTTGATGGAACTGAGTAAAGTTCAATCATCCAAATATATTATGTCATGTAGGCCTGTAAATAACGCACTCAGATTAAGAAGTACAAAGAAAGTACTTAACTACTAAATG

Function

NR:

description
LOW QUALITY PROTEIN: calmodulin-like protein 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU694620 True 759 lncRNA 0.34 1 42984725 42985483

Neighbor

gene id symbol gene type direction distance location
LOC110527803 LOC106582769 coding downstream 1889 42960419 ~ 42982836 (-)
LOC110527802 LOC106582768 coding downstream 32449 42945197 ~ 42952276 (-)
LOC110527801 LOC106582766 coding downstream 51693 42929249 ~ 42933032 (-)
LOC110527798 epha2 coding downstream 73596 42891310 ~ 42911129 (-)
LOC110527797 hspb7 coding downstream 95233 42888618 ~ 42889492 (-)
LOC110527805 NA coding upstream 5964 42991447 ~ 43001777 (-)
LOC110527807 LOC106582772 coding upstream 17831 43003314 ~ 43027816 (-)
LOC110527806 LOC106582605 coding upstream 49159 43034642 ~ 43329567 (-)
LOC110527809 LOC106582795 coding upstream 442896 43428379 ~ 43433682 (-)
LOC110527812 LOC106582796 coding upstream 451397 43435578 ~ 43439076 (-)
G610109 NA non-coding downstream 42200 42942126 ~ 42942525 (-)
G610103 NA non-coding downstream 48104 42936397 ~ 42936621 (-)
G610102 NA non-coding downstream 48467 42935956 ~ 42936258 (-)
G610101 NA non-coding downstream 48955 42935531 ~ 42935770 (-)
G610099 NA non-coding downstream 65190 42919213 ~ 42919535 (-)
G610180 NA non-coding upstream 120547 43106030 ~ 43122712 (-)
G610182 NA non-coding upstream 125370 43107127 ~ 43162969 (-)
G610254 NA non-coding upstream 257716 43243199 ~ 43243449 (-)
G610356 NA non-coding upstream 368319 43353802 ~ 43354039 (-)
G610359 NA non-coding upstream 369887 43355370 ~ 43355588 (-)
G610047 NA other downstream 148656 42835747 ~ 42836069 (-)
G608900 NA other downstream 959021 41968569 ~ 42025704 (-)
G608888 LOC106582750 other downstream 1033481 41944571 ~ 41951244 (-)
LOC110527764 LOC106582736 other downstream 1635826 41156665 ~ 41348915 (-)
G610190 NA other upstream 127665 43113148 ~ 43116144 (-)
G610183 NA other upstream 142328 43127811 ~ 43167320 (-)
G610185 NA other upstream 166087 43151570 ~ 43157089 (-)

Expression


Co-expression Network