G610180


Basic Information

Item Value
gene id G610180
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43106030 ~ 43122712 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU694676
gtgctcttctcctgtacccgtgctctactcctgtccccgtactctactcctgttcctgttctttactcctgtacctgtgctttactcctgtatccgtgctctactcctgtcctcgtgcactactcctgtcctcgtgctctactcctgtacctgtgctctactcctgtacccgtgctctactcctgtacccgtgctctactcctgtacccgtgctctactcctgtacccgtgctctactcctgtcctcgtgctctactcctgtcctcgtgctctactcctgtacctgtgctctactcctgtacccgtgctctaatCCTggcctcgtgctctactcctgtacctgtgctctactcctgtacccgtgcttttctcctgtacttttgctctactcctgtacccgtgctcttctcctgtacccatgctctactcctgtacccgtgctctactctgctctacccctgtacccgtgctctacttcTGTACCCTTGCTCgtctcctgtactcgtgctctactcatgttcccgtgctctactcctgtacctttgctctactcctgtacctttgctctactcctgtacctttgctc
>TU694677
gtgctcttctcctgtacccgtgctctactcctgtccccgtactctactcctgttcctgttctttactcctgtacctgtgctttactcctgtatccgtgctctactcctgtcctcgtgcactactcctgtcctcgtgctctactcctgtacctgtgctctactcctgtacccgtgctctactcctgtacccgtgctctactcctgtacccgtgctctactcctgtagccgtgctctactcctgtccttgtgctctactcctgtcctcgtgctctactcctgtagccgtgctctactcctgtagccgtgctctactcctgtcctcgtgctctactcctgtactcgtgctctactcctgtacccgtgctctactcctgttttcgtgctctactcctgtactcgtgctctattcctgtcctcgtgctctactcctgtcctcgtgctctactcctgtacctgtgctttactcatgtacctgtgc

Function

NR:

description
PREDICTED: mucin-17-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU694676 False 586 lncRNA 0.54 2 43106030 43122712
TU694677 True 479 lncRNA 0.54 2 43117924 43122712

Neighbor

gene id symbol gene type direction distance location
LOC110527807 LOC106582772 coding downstream 78214 43003314 ~ 43027816 (-)
LOC110527805 NA coding downstream 104253 42991447 ~ 43001777 (-)
LOC110527803 LOC106582769 coding downstream 123194 42960419 ~ 42982836 (-)
LOC110527802 LOC106582768 coding downstream 153754 42945197 ~ 42952276 (-)
LOC110527801 LOC106582766 coding downstream 172998 42929249 ~ 42933032 (-)
LOC110527809 LOC106582795 coding upstream 305667 43428379 ~ 43433682 (-)
LOC110527812 LOC106582796 coding upstream 314168 43435578 ~ 43439076 (-)
LOC110527811 LOC106582799 coding upstream 316502 43439214 ~ 43458193 (-)
zmynd10 zmynd10 coding upstream 334683 43457395 ~ 43466285 (-)
cish cish coding upstream 364381 43487093 ~ 43491299 (-)
G610132 NA non-coding downstream 120547 42984725 ~ 42985483 (-)
G610109 NA non-coding downstream 163505 42942126 ~ 42942525 (-)
G610103 NA non-coding downstream 169409 42936397 ~ 42936621 (-)
G610102 NA non-coding downstream 169772 42935956 ~ 42936258 (-)
G610101 NA non-coding downstream 170260 42935531 ~ 42935770 (-)
G610254 NA non-coding upstream 120487 43243199 ~ 43243449 (-)
G610356 NA non-coding upstream 231090 43353802 ~ 43354039 (-)
G610359 NA non-coding upstream 232658 43355370 ~ 43355588 (-)
G610382 NA non-coding upstream 251564 43374276 ~ 43374481 (-)
G610395 NA non-coding upstream 261280 43383992 ~ 43384236 (-)
G610047 NA other downstream 269961 42835747 ~ 42836069 (-)
G608900 NA other downstream 1080326 41968569 ~ 42025704 (-)
G608888 LOC106582750 other downstream 1154786 41944571 ~ 41951244 (-)
LOC110527764 LOC106582736 other downstream 1757131 41156665 ~ 41348915 (-)
G610183 NA other upstream 5099 43127811 ~ 43167320 (-)
G610185 NA other upstream 28858 43151570 ~ 43157089 (-)
LOC110527816 LOC106582802 other upstream 403979 43526691 ~ 43537037 (-)
G610570 LOC106582807 other upstream 456381 43579093 ~ 43579964 (-)

Expression


Co-expression Network