G609642


Basic Information

Item Value
gene id G609642
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43262112 ~ 43262462 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU694097
catcatgatgctgccaccaccatgcttcactgtaggtatagtgccaggtttcctctggATGTGACACTTTGCATtttggccaaagagttcaatcttggttttatcagaccagataatcttgtttctcatggtctaagagtcctttaagtgcctttttcTGAAGAGTGTCTTCCATCTGACCACTCTACTATTATTTTCCATTATTACTTTTATTCAATGTAGGATAACATTCTAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU694097 True 235 lncRNA 0.39 2 43262112 43262462

Neighbor

gene id symbol gene type direction distance location
LOC110527808 ab14b coding upstream 226901 43027924 ~ 43035211 (+)
LOC110527804 cssa22h3orf18 coding upstream 270748 42985660 ~ 42991364 (+)
rbp7b LOC106582767 coding upstream 326864 42932983 ~ 42935248 (+)
LOC110527799 LOC106582765 coding upstream 331478 42923547 ~ 42930634 (+)
LOC110527794 LOC106582762 coding upstream 378432 42854920 ~ 42883680 (+)
LOC110527818 NA coding downstream 262225 43524687 ~ 43526668 (+)
LOC110528952 NA coding downstream 264469 43526931 ~ 43529047 (+)
mon1bb LOC106582805 coding downstream 274535 43536997 ~ 43545817 (+)
si:dkey-183j2.10 LOC106582807 coding downstream 305198 43567660 ~ 43582311 (+)
ppcs ppcs coding downstream 702015 43964477 ~ 43966869 (+)
G609582 NA non-coding upstream 91974 43169283 ~ 43170138 (+)
G609573 NA non-coding upstream 94818 43106915 ~ 43167294 (+)
G609542 NA non-coding upstream 212401 43047877 ~ 43049711 (+)
G609532 NA non-coding upstream 241212 43017894 ~ 43020900 (+)
G609533 NA non-coding upstream 247450 43009544 ~ 43014662 (+)
G610332 NA non-coding downstream 75490 43337952 ~ 43338163 (+)
G610343 NA non-coding downstream 83730 43346192 ~ 43346700 (+)
G610360 NA non-coding downstream 97051 43359513 ~ 43359722 (+)
G610387 NA non-coding downstream 114213 43376675 ~ 43376897 (+)
G610394 NA non-coding downstream 121439 43383901 ~ 43384242 (+)
G609436 NA other upstream 440867 42820956 ~ 42821245 (+)
G608390 LOC106582745 other upstream 1431304 41827211 ~ 41830808 (+)
G607904 NA other upstream 1798943 41462824 ~ 41463169 (+)
G606977 NA other upstream 2627673 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 2821480 40438879 ~ 40457742 (+)
G610436 NA other downstream 147929 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 321558 43584020 ~ 43584896 (+)
G610622 NA other downstream 566542 43829004 ~ 43831880 (+)
si:dkey-264d12.5 LOC106582817 other downstream 740162 44002556 ~ 44035143 (+)
G613664 NA other downstream 3016272 46278734 ~ 46279333 (+)

Expression


Co-expression Network