G610343


Basic Information

Item Value
gene id G610343
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43346192 ~ 43346700 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU694857
gTATAatacctagcagtactacttatttctctAAGAGTGAGGCGgacatacagtacaagtcaaaagtttgaacacctactcattcaagggtttttctttatttgtactattttctacattgtagaataatagtcaagacatcaaaactatgaaataacacatatggaatcatgtagtaaccaaaaaagtgttaaacaaatcaaattatattttttatttgagattcttcgaagtagccaccctttgccttgatggcagctttgcacactcttggcattatctcaaccagcttcatgaggaatgcttttccaacagtcttgaaggagttcccacatatgctgagcacttgttggctatttttgcttcactctgcggtccaactcatcccaaatcatctcaattgggttgaggtcggttatttgtggaggctaggtcatctgatgcaacactccatcactctccttcttggtgaaatagcccttacacagcctggaggtgtgttttgggtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU694857 True 509 lncRNA 0.39 1 43346192 43346700

Neighbor

gene id symbol gene type direction distance location
LOC110527808 ab14b coding upstream 310981 43027924 ~ 43035211 (+)
LOC110527804 cssa22h3orf18 coding upstream 354828 42985660 ~ 42991364 (+)
rbp7b LOC106582767 coding upstream 410944 42932983 ~ 42935248 (+)
LOC110527799 LOC106582765 coding upstream 415558 42923547 ~ 42930634 (+)
LOC110527794 LOC106582762 coding upstream 462512 42854920 ~ 42883680 (+)
LOC110527818 NA coding downstream 177987 43524687 ~ 43526668 (+)
LOC110528952 NA coding downstream 180231 43526931 ~ 43529047 (+)
mon1bb LOC106582805 coding downstream 190297 43536997 ~ 43545817 (+)
si:dkey-183j2.10 LOC106582807 coding downstream 220960 43567660 ~ 43582311 (+)
ppcs ppcs coding downstream 617777 43964477 ~ 43966869 (+)
G610332 NA non-coding upstream 8029 43337952 ~ 43338163 (+)
G609642 NA non-coding upstream 83730 43262112 ~ 43262462 (+)
G609582 NA non-coding upstream 176054 43169283 ~ 43170138 (+)
G609573 NA non-coding upstream 178898 43106915 ~ 43167294 (+)
G609542 NA non-coding upstream 296481 43047877 ~ 43049711 (+)
G610360 NA non-coding downstream 12813 43359513 ~ 43359722 (+)
G610387 NA non-coding downstream 29975 43376675 ~ 43376897 (+)
G610394 NA non-coding downstream 37201 43383901 ~ 43384242 (+)
G610402 NA non-coding downstream 40451 43387151 ~ 43387440 (+)
G610417 NA non-coding downstream 53916 43400616 ~ 43401067 (+)
G609436 NA other upstream 524947 42820956 ~ 42821245 (+)
G608390 LOC106582745 other upstream 1515384 41827211 ~ 41830808 (+)
G607904 NA other upstream 1883023 41462824 ~ 41463169 (+)
G606977 NA other upstream 2711753 40634181 ~ 40634439 (+)
LOC110527751 NA other upstream 2905560 40438879 ~ 40457742 (+)
G610436 NA other downstream 63691 43410391 ~ 43410806 (+)
G610563 LOC106582806 other downstream 237320 43584020 ~ 43584896 (+)
G610622 NA other downstream 482304 43829004 ~ 43831880 (+)
si:dkey-264d12.5 LOC106582817 other downstream 655924 44002556 ~ 44035143 (+)
G613664 NA other downstream 2932034 46278734 ~ 46279333 (+)

Expression


Co-expression Network