XLOC_025384


Basic Information

Item Value
gene id XLOC_025384
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 26635820 ~ 26636398 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052678
CTTCCTCGTCCAACCTTTCACAATCCGACACTCAGAGTAACAAGAAAATAAGAGTAAATACCGCTCGCCGTACAGTTATGTCATTATGAGAGTCTGTGGGCGAACATACACAGATGTCAAGATGGCTGATCAATGCCCTGGCGCACATTTCTTTGTACAGGAGCGAGTGGATATCTtggtgcgaatgagtgtgtaggtgtgtgtaaAATAACTCACCCGCGCTTGGATTCTGCCCCGGGTATCAATCACACACCGCCGTGCTGATCCCAGGACACAACAGAGAGCCTCCATCATCATCTGTCTGTTCCTGAAGAAGAACGAGTGCTGAGAAAACTACGGCTGTGAGGATGATGGTTCTCAGGGACTGCATGAAATACTGATACAAGTGAAAACTCGACAGTAAGAAGATCTTCAGCAGCTTGAACCCAACAAGGGCTCTTGAGAAGGAGCATGCACTGCCTTTT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052678 True 464 lncRNA 0.48 2 26635820 26636398

Neighbor

gene id symbol gene type direction distance location
XLOC_025383 NA coding upstream 219036 26411233 ~ 26416784 (+)
XLOC_025382 NA coding upstream 274022 26355294 ~ 26361798 (+)
XLOC_025381 rps15a coding upstream 284164 26345732 ~ 26351656 (+)
XLOC_025380 si:ch211-156b7.4 coding upstream 292172 26342768 ~ 26343648 (+)
XLOC_025379 si:ch211-156b7.5 coding upstream 309057 26322596 ~ 26326763 (+)
XLOC_025385 tmc5 coding downstream 97764 26734162 ~ 26751819 (+)
XLOC_025386 socs1a coding downstream 176660 26813058 ~ 26814953 (+)
XLOC_025387 dexi coding downstream 268626 26905024 ~ 26906351 (+)
XLOC_025388 emp2 coding downstream 391383 27027781 ~ 27056180 (+)
XLOC_025389 grin2aa coding downstream 435351 27071749 ~ 27277695 (+)
XLOC_025429 BX649540.1 misc downstream 3612341 30248739 ~ 30249036 (+)
XLOC_025374 FP016144.1 non-coding upstream 441361 26194344 ~ 26194459 (+)
XLOC_025371 NA non-coding upstream 555420 26076494 ~ 26080400 (+)
XLOC_025364 NA non-coding upstream 648876 25985339 ~ 25986944 (+)
XLOC_025390 NA non-coding downstream 657910 27294308 ~ 27343689 (+)
XLOC_025391 NA non-coding downstream 710441 27346839 ~ 27494805 (+)
XLOC_025392 BX000529.1 non-coding downstream 770698 27407096 ~ 27407211 (+)
XLOC_025393 NA non-coding downstream 957975 27594373 ~ 27601473 (+)
XLOC_025402 NA non-coding downstream 2013549 28649947 ~ 28733765 (+)

Expression


Co-expression Network