Gene
RNA
| Item | Value |
|---|---|
| gene id | G610517 |
| gene name | LOC106582800 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 43495012 ~ 43497725 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| twinfilin-2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU695062 | True | 447 | lncRNA | 0.48 | 2 | 43495012 | 43497725 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527808 | ab14b | coding | upstream | 459801 | 43027924 ~ 43035211 (+) |
| LOC110527804 | cssa22h3orf18 | coding | upstream | 503648 | 42985660 ~ 42991364 (+) |
| rbp7b | LOC106582767 | coding | upstream | 559764 | 42932983 ~ 42935248 (+) |
| LOC110527799 | LOC106582765 | coding | upstream | 564378 | 42923547 ~ 42930634 (+) |
| LOC110527794 | LOC106582762 | coding | upstream | 611332 | 42854920 ~ 42883680 (+) |
| LOC110527818 | NA | coding | downstream | 26962 | 43524687 ~ 43526668 (+) |
| LOC110528952 | NA | coding | downstream | 29206 | 43526931 ~ 43529047 (+) |
| mon1bb | LOC106582805 | coding | downstream | 39272 | 43536997 ~ 43545817 (+) |
| si:dkey-183j2.10 | LOC106582807 | coding | downstream | 69935 | 43567660 ~ 43582311 (+) |
| ppcs | ppcs | coding | downstream | 466752 | 43964477 ~ 43966869 (+) |
| G610512 | cish | non-coding | upstream | 6028 | 43486861 ~ 43488984 (+) |
| G610477 | NA | non-coding | upstream | 39409 | 43455337 ~ 43455603 (+) |
| G610476 | NA | non-coding | upstream | 40021 | 43454628 ~ 43454991 (+) |
| G610475 | NA | non-coding | upstream | 41067 | 43453655 ~ 43453945 (+) |
| G610474 | NA | non-coding | upstream | 41538 | 43453170 ~ 43453474 (+) |
| G610528 | LOC106582801 | non-coding | downstream | 16040 | 43513765 ~ 43514743 (+) |
| G610545 | NA | non-coding | downstream | 54605 | 43552330 ~ 43560669 (+) |
| G610564 | LOC106582806 | non-coding | downstream | 87523 | 43585248 ~ 43586231 (+) |
| G610627 | NA | non-coding | downstream | 125871 | 43623596 ~ 43673775 (+) |
| G610622 | NA | non-coding | downstream | 332113 | 43829004 ~ 43831880 (+) |
| G610436 | NA | other | upstream | 84206 | 43410391 ~ 43410806 (+) |
| G609436 | NA | other | upstream | 673767 | 42820956 ~ 42821245 (+) |
| G608390 | LOC106582745 | other | upstream | 1664204 | 41827211 ~ 41830808 (+) |
| G607904 | NA | other | upstream | 2031843 | 41462824 ~ 41463169 (+) |
| G606977 | NA | other | upstream | 2860573 | 40634181 ~ 40634439 (+) |
| G610563 | LOC106582806 | other | downstream | 86295 | 43584020 ~ 43584896 (+) |
| si:dkey-264d12.5 | LOC106582817 | other | downstream | 504899 | 44002556 ~ 44035143 (+) |
| G613664 | NA | other | downstream | 2781009 | 46278734 ~ 46279333 (+) |
| LOC110528958 | NA | other | downstream | 3134397 | 46629591 ~ 46638492 (+) |
