G610570 (LOC106582807)



Basic Information


Item Value
gene id G610570
gene name LOC106582807
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 43579093 ~ 43579964 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU695139
CTGGCTACTACACAGATGGAGACAGCAGTCCCCAGGTACGCAGCGAGGATCCCCACCCAGGTCTCTACTGAGAAGGGGGTCAGGAAGTCAAAGATGCCAGCCTCTTCTGAGATGTCTTTCCTCAGGAGAATGCTGATTCCTGTCTGCATGAAGGGTTTGGTCATCCCCACAACCTTCTCCCGGGCAGCAGTGAGGGTCAGAGGAGCAATCGCCAGGTCTGCCCCTTTCTCACCACCTCTCCGATCATCCCGTTCCAGGCCCCAGTCTCATCCTGCCTGCCATAGGACCCATCTTTCACCAGGTGCACGTTGTACTTGAAGTCCAGTTTCTTGGCCAGTTCAGACAGCAGGTCCATGCAGTAACCTTCCATCTGAGAGCCTTTGGACATGGTGTATGGATCTTG

Function


NR:

description
glutamate receptor U1-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU695139 True 403 TUCP 0.55 2 43579093 43579964

Neighbor


gene id symbol gene type direction distance location
brpf3a LOC106582804 coding downstream 6770 43545876 ~ 43572323 (-)
LOC110527816 LOC106582802 coding downstream 42056 43526691 ~ 43537037 (-)
wdr82 swd2 coding downstream 64350 43511541 ~ 43514743 (-)
LOC110527813 LOC106582800 coding downstream 72621 43492886 ~ 43506472 (-)
cish cish coding downstream 87794 43487093 ~ 43491299 (-)
plch2b LOC106582806 coding upstream 2350 43582314 ~ 43596447 (-)
skib LOC106582808 coding upstream 20585 43600549 ~ 43639637 (-)
LOC110527821 LOC106582812 coding upstream 65406 43645370 ~ 43663650 (-)
kaznb LOC106582810 coding upstream 83845 43663809 ~ 43823887 (-)
prdm2b LOC106582809 coding upstream 251727 43831691 ~ 43849517 (-)
G610579 NA non-coding downstream 101520 43477270 ~ 43477573 (-)
G610502 NA non-coding downstream 107853 43470962 ~ 43471240 (-)
G610500 NA non-coding downstream 109179 43469706 ~ 43469914 (-)
G610495 NA non-coding downstream 125687 43453115 ~ 43453406 (-)
G610492 NA non-coding downstream 128606 43450201 ~ 43450487 (-)
G611167 NA non-coding upstream 19923 43599887 ~ 43600118 (-)
G611214 NA non-coding upstream 86743 43666707 ~ 43667658 (-)
G611215 NA non-coding upstream 88449 43668413 ~ 43668921 (-)
G611275 NA non-coding upstream 188394 43768358 ~ 43768591 (-)
G611423 NA non-coding upstream 454532 44034496 ~ 44034844 (-)
LOC110527812 LOC106582796 other downstream 140180 43435578 ~ 43439076 (-)
G610183 NA other downstream 411773 43127811 ~ 43167320 (-)
G610182 NA other downstream 416124 43107127 ~ 43162969 (-)
G611674 NA other upstream 904891 44484855 ~ 44485752 (-)
G613411 LOC106582852 other upstream 2295001 45874965 ~ 45875700 (-)
LOC110527888 LOC106582868 other upstream 3688359 47260325 ~ 47284791 (-)
G616880 NA other upstream 4907083 48487047 ~ 48529168 (-)
G617624 LOC106582928 other upstream 5604460 49184424 ~ 49186096 (-)

Expression



Co-expression Network